Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq224 109 4e-19
>seq224
Length=1007144
Score = 109 bits (120), Expect = 4e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
||||| || || || || | |||| ||| ||||| | ||||| || |||| || | |
Sbjct 62064 AGTCTCAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGACAGAGTTCTT 62123
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
| || |||| |||||| || || |||||||||| ||| || || | || | ||||||
Sbjct 62124 CCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCTTCC 62183
Query 43012 TTTTCGCTGATCA-ACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGT 43070
|| || |||| |||||| || || | | ||||| || ||||| |||| ||
Sbjct 62184 TTGTCCTGGATCTTACTCTTC-ACATTGTCTATGGTGTCAGAAGATTCGACCTCTAAAGT 62242
Query 43071 TATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||||| || || |||| |||||| ||||||||||||||
Sbjct 62243 GATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281
Score = 109 bits (120), Expect = 4e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
||||||| ||||| || | || |||||||| | |||||||| |||| || |
Sbjct 62520 AGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTA 62579
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
| || ||||| ||||| || ||||||||||||| |||||| || | || | ||||||
Sbjct 62580 CCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCC 62639
Query 43012 TTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGT 43070
|| || |||| |||| || || || | | ||||| || ||||| || | ||
Sbjct 62640 TTGTCCTGGATCTTACTC-TTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGT 62698
Query 43071 TATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||||| || || ||||||||||| |||||||| |||||
Sbjct 62699 GATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 62737
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | |||| ||||||||| | ||||| || |||
Sbjct 461563 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 461504
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | |||| |||||||| || || ||||| ||||||| ||||| || | ||
Sbjct 461503 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 461444
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || ||| ||||| || ||| ||||| || || ||
Sbjct 461443 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACT 461384
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || ||||| || ||||||| ||| || || ||||||||||| ||
Sbjct 461383 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 461334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381367522369926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |