Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq35 279 7e-70 seq57 206 4e-48 >seq35 Length=195003 Score = 279 bits (308), Expect = 7e-70 Identities = 1328/2085 (64%), Gaps = 71/2085 (3%) Strand=Plus/Minus Query 70797 CAATG-TAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTT 70855 ||||| |||| ||||| | || || ||||||| || | | ||| ||||| || || | Sbjct 52046 CAATGGTAAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAATACATACCGGTCT 51987 Query 70856 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCG 70914 ||||||| |||| ||||| ||||||||||| ||||| || || | | || Sbjct 51986 TTAGACCTTTCTTCCAACCGTAGAAATGCATACTTGTTAGCTTACCCATGGTTGGGGCAC 51927 Query 70915 GCTATGTGAATA--TTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 70972 || | ||||| |||| || || |||||||||| | | | | ||| || |||| Sbjct 51926 GCAA---GAATAAATTCAAAGAATGGGATTGATCGATGTAAACGGCACGGTCGGCTGCCA 51870 Query 70973 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 71031 | || ||||| |||||||||| ||||||||||| ||| ||||| || || | ||| ||| Sbjct 51869 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTATACAAATCTTTCAAT-TCT 51811 Query 71032 TCTGGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCAATAATCCTATTT-TTGAT 71087 | ||| | ||||| || | |||||||| ||| | || || | |||| || || Sbjct 51810 TGTGGTACGTTTGGTAAACCTTGAATGGAACCATTTTGTGTGATTAGA-TATTGCTTCAT 51752 Query 71088 CTCTTCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTT 71146 | |||| ||| ||| | || ||| | | || | | ||||| || |||| Sbjct 51751 ACCATCATCCCA-AATACCCAAATCAACCAAATCACGCAGTAAGTATGGATTGACGACTT 51693 Query 71147 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACT 71206 ||||||| ||||| | || | ||||| ||| || || ||| ||||| | ||| Sbjct 51692 GAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGTTCGAAACACT 51633 Query 71207 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC---CAATAGAC 71263 | || | || ||||| || | ||| |||||||| ||||||||||||| ||| ||| Sbjct 51632 CGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATGGTCAA-AGAG 51574 Query 71264 TATTTCTAAGACCATG--TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATC 71321 | |||||| |||||| | || ||| | || | | | || ||||||| ||| | | | Sbjct 51573 T--TTCTAACACCATGCTTCAT--GATGTCATTTCTCAAAGTATCCCAATCCCACATACC 51518 Query 71322 CGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGC 71381 | ||| | || || | | ||| || ||| Sbjct 51517 GTAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTG 51458 Query 71382 ATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATA 71441 | || |||||||| || ||| ||| ||||| |||||| || || | | ||| Sbjct 51457 GAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATG 51398 Query 71442 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATA 71501 || |||||||| || || | |||| || ||||||| | || ||||| | Sbjct 51397 GTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGTCGAATGGTAA 51338 Query 71502 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCT 71561 | || | || || | ||| || || ||||| || || | | | || || |||||||| Sbjct 51337 ACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCT 51278 Query 71562 CTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 71621 | ||||||| || ||||| | ||||||||| ||| || |||| || || | Sbjct 51277 CATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAACGTTGTTTAA 51218 Query 71622 ATTTCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTC------- 71673 || | || | || ||||| | || | ||| || || | | || | Sbjct 51217 GTTAC-GAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATATGTAGAAGTTT 51159 Query 71674 --CCATCTA------TTACAA-ACACGTT--CAAGGCAACAGATGCCAGATTACAAACGG 71722 || ||| || ||| | | | | ||| |||||||| |||| |||||||| | Sbjct 51158 TGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAG 51099 Query 71723 CTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGG 71782 | ||||| | | ||| |||| | ||||||| ||| | ||| ||||||| Sbjct 51098 CAGTCTCATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTAGACGACTTGATAA 51039 Query 71783 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAG 71842 || || || | ||| || || ||||||| |||||||| |||| || ||| || | Sbjct 51038 CACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAACAACAAAGGGTG 50979 Query 71843 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT 71902 |||||||||| | || | ||| | || | | ||| | | | ||||| || | Sbjct 50978 TACCAGTTTCCGTTTGTGCTTCCAATATAGAGTACCACAATTTTTGGGCCTTGAT---AG 50922 Query 71903 TCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAG 71962 |||| | |||| ||||||| | ||||||| ||| || ||||| || | | Sbjct 50921 TCTTACCACGGCCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAATTCGTCACCGTA-G 50863 Query 71963 CATTGTCT-AATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT 72021 || | || || || ||| | ||| | | || | ||| || | || | Sbjct 50862 CAGTCACTTAAGCCTGGAGCCGATGTAGGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCG 50803 Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || ||||| || ||||| |||| ||| |||||| |||| |||||| | | Sbjct 50802 ACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACGGATT 50743 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || || || ||||||| ||| |||| ||| | | ||||||| ||||| || Sbjct 50742 TCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCATGGC 50683 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 ||||| |||| || | | || || | ||||| || ||||| || | || | || Sbjct 50682 TCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACGGGCA 50623 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 ||||| || | || | | ||| ||||| | || || || | || || || || | Sbjct 50622 GTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCA 50563 Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321 || || || | |||||||| ||| ||| |||||| || || || || |||| Sbjct 50562 ATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTG 50503 Query 72322 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 72381 || || || || ||| || || || || ||||| || || || ||||||| |||| Sbjct 50502 GAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATT 50443 Query 72382 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 72441 || ||| |||||| |||||||| | || || || || ||||| || ||| Sbjct 50442 GCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGA 50383 Query 72442 GAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT- 72500 || ||||| ||||| ||||| |||| | || || || || | ||| | || || Sbjct 50382 GAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATG 50323 Query 72501 --ATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACG 72558 ||| | ||| || |||| ||||| | ||| | | || || || | |||| | Sbjct 50322 TTATCACCGTGA---ATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGCA 50266 Query 72559 ATCTTGTTATTT-ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 72617 | |||| || | | |||| ||||| || ||| |||||||||||||| || || | Sbjct 50265 A-CTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAACT 50207 Query 72618 GTA-TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAA 72676 ||| |||||| |||| || || | |||| | || || ||||||||||| | || | | Sbjct 50206 GTACTGAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTTGTTTTCCATGA 50148 Query 72677 CTATAT-----CCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 72731 | |||| ||| || | ||||| || |||| ||| ||| | ||| || Sbjct 50147 CAATATTGTAAACATCGTCA-----GAAATCATAGGAGCGGCTTTACCAGTAGCAGGGTT 50093 Query 72732 AACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAG 72791 || || | | | |||||| | |||| | ||| |||| | |||| || |||| Sbjct 50092 GACGTATCTATAAAGATCCTCAACAACTTTAGAAAACTGTTTCGTGGTTTGTTTATGTAA 50033 Query 72792 ATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 ||| || | ||| ||||| || || | | | || |||||||| || Sbjct 50032 ATTAGAAATGGCGATTCTAGCAGCCAAAGTAGCGTAATCTGGGTG 49988 >seq57 Length=156688 Score = 206 bits (228), Expect = 4e-48 Identities = 692/1068 (65%), Gaps = 17/1068 (2%) Strand=Plus/Minus Query 71776 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATA 71835 |||||||| || | || ||||| || ||||| ||||||| ||||||||||||| || Sbjct 59012 TTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATG 58953 Query 71836 AACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 71895 || || ||||| ||||| | || | || | || || | ||| || | ||||||| Sbjct 58952 AAGGGTGTACCGGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTG 58893 Query 71896 ATTATATT-CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTC 71954 || | || | | | |||||||||||| | ||||||| |||||| || || Sbjct 58892 ATGGTTTTACCACGACC----TTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTC 58837 Query 71955 TCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATC 72014 |||||| | | ||| || || || || | || | | || | ||| | ||||| Sbjct 58836 ACCCCAAACGTCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATC 58777 Query 72015 ATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGT 72074 || | || || ||||| || ||||| |||||||| ||||| || | |||||| | Sbjct 58776 CTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGC 58717 Query 72075 TCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 72134 | | || || || || | ||||| | | ||||| || | | || || | ||| Sbjct 58716 ACGAATTTCTTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATG 58657 Query 72135 CCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTA 72194 ||| || |||||| | | ||| | | || || | ||||| || || || || | ||| Sbjct 58656 CCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTA 58597 Query 72195 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGT 72254 | || ||||| || | || | | ||| ||||| | || || || | ||| ||||| Sbjct 58596 ACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGT 58537 Query 72255 CCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAAT-TGATAGACCTATTCCCCCTG 72313 || | ||||| || ||| |||||||||| | || ||| ||||| | || |||| Sbjct 58536 ACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGA-AGACCAACACCACCTG 58478 Query 72314 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 72373 | | || || || | || || ||| || || || || || || || || || | Sbjct 58477 CAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGT 58418 Query 72374 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 72433 || ||||| || || ||||| ||||||||| || | || || |||||||||| Sbjct 58417 CCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATA 58358 Query 72434 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTG 72493 || || |||||||| || || || | |||| | ||||| |||| | | | Sbjct 58357 GTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGG 58298 Query 72494 ATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTT 72553 | || ||||| | || || |||| || |||||||| | || ||| || || | || Sbjct 58297 ACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTT 58238 Query 72554 CAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 72613 | | | | | || | | | || |||||| ||||| ||| ||||| ||||||| Sbjct 58237 CGGCCACTTCACCGTCTAGTCTTAGCAGGTAGGAACGTTCCAGAGTCTTAAACCCAAAAT 58178 Query 72614 AGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671 || |||| ||||| |||| ||||| | || |||| || || |||| || | || Sbjct 58177 AGGTGTACTTGAAA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTTC 58120 Query 72672 GTTAACTATATCCATGGTGA-TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGG 72728 | || |||| || || | | | ||||| || || | ||| ||||| | ||| Sbjct 58119 CATGACAATAT---TGTAGACTTCATCCGAAATCATAGGGGCATGCTTCCCCGTGGCAGG 58063 Query 72729 ATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTG 72788 || || ||| | || || || || || | || | ||| | || | ||| || Sbjct 58062 GTTGACCCAGTCGTGCAAGTCTTCAATGACCTTGGAGAACTGCTTTGTGGTCTGCTTATG 58003 Query 72789 TAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 || || || | ||| ||||| ||||| | |||| ||||| || || Sbjct 58002 TAAGTTGGAGATGGCAATTCTAGCGGCCAACGTGGCGTAATCAGGGTG 57955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135450009720