Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq224 168 2e-36
seq235 147 5e-30
seq201 147 5e-30
seq257 141 2e-28
>seq224
Length=1007144
Score = 168 bits (186), Expect = 2e-36
Identities = 180/238 (76%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||||||| || || | || | || ||||| || ||||| || || ||
Sbjct 62736 ATACCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCC 62795
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || |||||||||||||| |||||||| ||||| ||||| | ||||||||| || |||
Sbjct 62796 GACAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGA 62855
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| || || | || || || || | ||||| || |||
Sbjct 62856 GGAATGCCTTCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCG 62915
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTA 104567
||||| | ||||||||||||||||| ||||| || || || || ||||| ||| ||
Sbjct 62916 ACCTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCATAGTGTCTA 62973
Score = 167 bits (184), Expect = 5e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||||||| || || | || | || || ||||| ||||| || || ||
Sbjct 62280 ATACCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCC 62339
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
||||| |||||||||||||| |||||||| ||||| ||||| | ||||||||| || |||
Sbjct 62340 GATAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGA 62399
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| | || || || || | ||| || | |||
Sbjct 62400 GGAATACCTTCCTTGTCCTGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCA 62459
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | || || |||||||| || || ||||| ||||| ||||||||
Sbjct 62460 ACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 62509
Score = 163 bits (180), Expect = 7e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||||||| || || || | || | |||||||| || ||||| || || ||
Sbjct 62508 ATACCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCC 62567
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || |||||||| ||||| | ||||| || |||||||| | |||||||| || |||
Sbjct 62568 GACAGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGA 62627
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || ||||| |||| ||| || || |||
Sbjct 62628 GGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCG 62687
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | || |||||||||||||| || ||||| ||||| ||||||||
Sbjct 62688 ACCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 62737
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||||||| || | |||| || | || || ||||| ||||| || |||||
Sbjct 62052 ATACCACCTCTTAGTCTCAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCT 62111
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| |||||||| || || || |||||||| ||||| ||||| | ||||| || || ||
Sbjct 62112 GACAGAGTTCTTCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGT 62171
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || ||||| |||| ||| || || |||
Sbjct 62172 GGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCG 62231
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||||| || |||||||||||||| | ||||| ||||| || |||||
Sbjct 62232 ACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
||||| || || || || || || || |||||||| | |||||| |||||||| | |||
Sbjct 461539 TGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCCAATTGC 461480
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| ||||| || || ||||| || || ||||||||
Sbjct 461479 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTA 461420
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | ||| || || ||| || || || |||||||||||||| ||
Sbjct 461419 GACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTACCGGTT 461360
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| || || || || || ||||| |||
Sbjct 461359 AAAGTCTTGACGAAAATTTGCATCTTG 461333
>seq235
Length=640350
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | |||| |||||| || ||||| || ||||| || |||||
Sbjct 599129 ATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCG 599188
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 599189 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 599248
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || |||||||| | ||| ||||| || | ||| || || |||
Sbjct 599249 GGGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCA 599308
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| ||||| || || |||||||||||
Sbjct 599309 ACTTCTAGAGTGATGGTCTTACCAGT 599334
>seq201
Length=186330
Score = 147 bits (162), Expect = 5e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | |||| |||||| || ||||| || || || || ||||||
Sbjct 47043 ATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 46984
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| | ||| || |||||||| |||| || ||||| ||||||
Sbjct 46983 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGA 46924
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || ||||| || | || || || |||
Sbjct 46923 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 46864
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| || | || || ||||||||||| | ||||| |||||
Sbjct 46863 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 46823
>seq257
Length=84383
Score = 141 bits (156), Expect = 2e-28
Identities = 291/428 (68%), Gaps = 21/428 (5%)
Strand=Plus/Plus
Query 268877 GATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAA 268936
|| |||||||| |||||||| | || ||||| |||| ||||| ||||| || ||
Sbjct 40786 GACGGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAG 40845
Query 268937 GCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGT 268996
|||| |||| ||||| |||||||| || || || || || || || || | |||
Sbjct 40846 GCCAAGAGTTTCTACGGGTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTCC 40905
Query 268997 CTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTATG 269056
| || || || || || || | || ||| |||| || | | || ||| | |
Sbjct 40906 TTGTTGATCGACACCTACATCAAGGACCCCAAGGAAAGC----GAGT-TCTTGTTCAACG 40960
Query 269057 AGA-----ACTAT----GGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATA 269107
| || || | | | || ||||| | |||||||| || | ||||||
Sbjct 40961 CCATCGACACCATCCCAGAAATCTGCGAGAAGG----CCGAATGGGCCCTTAGATGGATC 41016
Query 269108 AACGATAGCGCG--CCT-TACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATA 269164
| || || ||| | ||| ||||| | || || || ||| | | |||||| |
Sbjct 41017 CAGGACGCCGATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTC 41076
Query 269165 TTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGA 269224
|||||||| ||||| || ||| | ||||| ||||||||||||||||| | ||||| ||
Sbjct 41077 TTCTTTTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGT 41136
Query 269225 TTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284
|| || ||||| |||||| |||| |||| ||||||||||| ||| |||||| || |||
Sbjct 41137 TTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGT 41196
Query 269285 TTATTATT 269292
|| || ||
Sbjct 41197 TTGTTGTT 41204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151391805725476
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |