Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq224 105 6e-18 >seq224 Length=1007144 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570 ||||| || || ||||| ||| ||| ||||||||||||||||| | | || | Sbjct 62294 CCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACC 62353 Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630 ||| ||||| || ||||| || |||| || | ||| || ||| || | || |||||| Sbjct 62354 GTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTT 62413 Query 48631 GTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTAT 48690 |||| || || ||||| | ||||| || | | | || ||| | ||||| Sbjct 62414 GTCCTGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTAT 62473 Query 48691 GGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| |||||||| |||||||| |||||||||||||| Sbjct 62474 GGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 62509 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 || || ||||| ||||| ||| ||| |||||||||||||| || | || || | Sbjct 62067 CTCAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGACAGAGTTCTTCCA 62126 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 |||||||| || ||||| || |||| || | |||||| || || | || ||||||| Sbjct 62127 TCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCTTCCTTG 62186 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| || || ||| | | ||||||| || | ||| || ||| | || || Sbjct 62187 TCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATA 62246 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || | |||||| |||||||| ||||| Sbjct 62247 GTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570 ||||| || || ||||| ||| |||||||||||||||||||| | || || | Sbjct 62750 CCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACC 62809 Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630 ||| ||||| || ||||| || |||| || | ||| || ||| || | | |||||| Sbjct 62810 GTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTT 62869 Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688 |||| ||||| ||||| | | || || ||||| | ||| || ||| | || Sbjct 62870 GTCCTGGATTTTGGACTTGACGTTGTCG--ATAGTATCAGAAGATTCGACCTCCAAAGTA 62927 Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733 || || ||||| || || || || || ||||| ||||| |||||| Sbjct 62928 ATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCATAGTGTCT 62972 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 |||| || || ||||| || |||||||||||||||||||| | || || | Sbjct 62523 CTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCA 62582 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || |||| ||| ||||| | |||| || | ||| || || || | || ||||||| Sbjct 62583 TCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTG 62642 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| || || ||| | | ||||||| || | ||| || ||| | || || Sbjct 62643 TCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTGATA 62702 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || |||||||| |||||||||||||| Sbjct 62703 GTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 62737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248905102447