Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq190 96.9 4e-15
seq437 89.7 6e-13
>seq190
Length=622597
Score = 96.9 bits (106), Expect = 4e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417
||| |||| ||||| || || |||||| | || |||||| || || |||||| |
Sbjct 167540 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACA 167481
Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAAC 19477
|||||| |||||||||||| ||||| ||| ||||| || || ||| | ||||| ||
Sbjct 167480 TATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTACCAGATTTAATTATCAAT 167421
Query 19478 CCACATGCTTTTCCAAGTCGAATGAC 19503
|| |||||| ||||| ||| |||||
Sbjct 167420 CCTCATGCTATTCCATCTCGTATGAC 167395
Score = 91.5 bits (100), Expect = 2e-13
Identities = 290/452 (64%), Gaps = 27/452 (6%)
Strand=Plus/Plus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
|||||| || | |||| | |||||| ||| | ||| ||||| || | ||||||||
Sbjct 26938 TTGTTCCTTCAAGGCTTCAACATGATCCTTATACACATGCGCATCCCCCAAAGTATGAAT 26997
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
|| ||||| |||| |||||| || ||| |||||| | || || | ||||| ||
Sbjct 26998 GAACTCACCCGGTTCCATATCGACGACTTTAGCAATCATTCTGGTCAACAGGGCATATGA 27057
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984
|| | |||||| || ||||||| |||||||| || | || |||||| |||
Sbjct 27058 GGCAATATTAAATGGCACACCTAGCCCCATATCACAGGAACGCTGGTATAACAAACATGA 27117
Query 6985 CAAGATAA-------------AATATTGTCTATAG---------CATAAAATTGACACAA 7022
| | | | | | ||| | | ||||||| || | ||
Sbjct 27118 AAGGCGAGGCTTACCGCTTCCACTTTCCTCTTTGGGGAAACTGACATAAAACTGTGAAAA 27177
Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082
| ||| ||||| |||||| | || || | ||| | |||||||||||| |||| |
Sbjct 27178 AATATGGCATGGTGGTAAAGCCATCTTGTCAAAATCTGCAGGATTCCAAGCACTCATGAT 27237
Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTAT 7142
|| | |||||| | || |||||||||||||| ||||| | | ||||| ||
Sbjct 27238 GATCCTTCTATCGTAAGGGTTTGTTTTTAATTTGTGTATAACCTGCTTCAGCTGATCGAT 27297
Query 7143 ACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTG 7202
|| || || ||| | | || || | | || | || || ||||||||||||||
Sbjct 27298 GCCTTGTCCGGTATAGTCATCATCGCACGTCTTGTATTGGGCACCGAAATGTCTCCATTG 27357
Query 7203 AAACCCATAAATAGGACCTAAATCACCTTCTT 7234
|||||||||| || || | || ||| |||
Sbjct 27358 GAACCCATAAACGGGGCCCAGGTCTCCTACTT 27389
>seq437
Length=774617
Score = 89.7 bits (98), Expect = 6e-13
Identities = 194/288 (67%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 164794 GTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATT 164853
|| |||||||| | || ||||||| |||||||| || | ||||||||||| |
Sbjct 350406 GTAGTTAATCAACTACTGGCTAAAATGGATGGTGTTGATCAACTGAATAATATTTTGGTC 350347
Query 164854 GTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTA 164913
||||||||||||| || ||||| || ||| |||| | ||||| || ||| ||||
Sbjct 350346 ATAGGTATGACCAATCGTAAAGATTTGATCGATATTGCTCTTTTACGTCCAGGTAGATTC 350287
Query 164914 GAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTT 164973
||| | | | ||||| ||||| ||| || |||| | || || ||||| | ||
Sbjct 350286 GAAGTTCAGGTTGAAATTCATTTACCGGACGAAAAAGGTAGACTGCAGATTTTTGACATT 350227
Query 164974 CATGTGGCTAAAATGAAATCCTGTGATAT-ATTATCTCCCGATGTAGATTTAAATAAAAT 165032
|| | ||||||| | | |||| || | | |||||| | ||| | || |
Sbjct 350226 CAAACGAAGAAAATGAGAGAAAATAATATGATGAGC-GACGATGTTAACTTAGCTGAACT 350168
Query 165033 AGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGT 165080
||| || |||||| |||| | ||||||||| | || || |||||
Sbjct 350167 AGCAGCTTTAACTAACAATTTTTCCGGTGCTGAAATTGAAGGTTTAGT 350120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595868670565200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |