Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq235 114 1e-20
seq224 111 2e-19
seq257 93.3 4e-14
>seq235
Length=640350
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
|| || || || || ||||| || | ||||| | ||| | ||||| ||||||||
Sbjct 599349 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 599290
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | |||||| |||||| ||||||||||| || || || || ||||||||| |
Sbjct 599289 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 599230
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | | |||||| |||||||||||
Sbjct 599229 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 599170
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | ||| | ||| ||||| | ||||| ||
Sbjct 599169 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 599132
>seq224
Length=1007144
Score = 111 bits (122), Expect = 2e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| ||||| |||||||| || | ||||| | || | |||||
Sbjct 62281 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAGACTATCACTTTAGAGGTCGAATCTTCT 62222
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | || || ||||| ||||| ||||| || || || || ||
Sbjct 62221 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAG 62162
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946
|| ||| | |||| || || |||||||| || |||| |||| ||||| |||| |
Sbjct 62161 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGAAGAACTCTGTCAG--ACTACA 62104
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||||| || ||| | || | ||| ||||||| ||||| ||
Sbjct 62103 ACATTCAAAAAGAGTCCACTCTTCACTTAGTCTTGAGACTAAGAGGTGG 62055
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| ||||||| || | ||||| | || | |||||
Sbjct 62737 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCT 62678
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | || || ||||| ||||| ||||| || ||||| || |||
Sbjct 62677 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAA 62618
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||| | |||| | || ||||| | ||||||| ||||| | || || |||
Sbjct 62617 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAAC 62558
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||||| |||||||| | || ||||||| ||||| ||||| ||
Sbjct 62557 ATTCAAAAGGAATCTACCCTTCACTTGGTCCTAAGACTAAGAGGTGG 62511
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| | || || || | || ||| | || | ||||
Sbjct 62509 ATGCAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCT 62450
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| ||||| ||||| ||||| || ||||| || |||
Sbjct 62449 GACACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 62390
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG-ACTATAA 26947
|| || | |||| || || |||||||| ||||| | ||||| || | || | || ||
Sbjct 62389 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAA-CGCTATCGGATTACAA 62331
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||||||||| || ||| | || ||||||| || || ||||| ||
Sbjct 62330 CATTCAAAAAGAGTCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 62283
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || ||| | ||||| || | || || | || | |||||
Sbjct 62965 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 62906
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || ||||| | ||||| || || ||||| ||||| || ||||| || |||
Sbjct 62905 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 62846
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| || || |||||||| ||||| | ||||| | || || |||
Sbjct 62845 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAAC 62786
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||||| ||||| ||| | || ||||||| || || ||||| ||
Sbjct 62785 ATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 62739
Score = 84.2 bits (92), Expect = 2e-11
Identities = 76/94 (81%), Gaps = 4/94 (4%)
Strand=Plus/Minus
Query 26907 GGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATAACATTCAAAAAGAATCTA 26964
|| |||||||| ||||||| ||||| ||||| |||||||||||||||| |||||||
Sbjct 61939 GGGAAACAACTGGAAGATGGTAGAACGCTGTCAG--ACTATAACATTCAAAAGGAATCTA 61882
Query 26965 CTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
| | || ||||||||||||| ||||| || ||
Sbjct 61881 CCCTTCACTTGGTCCTGAGACTAAGAGGTGGCAA 61848
>seq257
Length=84383
Score = 93.3 bits (102), Expect = 4e-14
Identities = 370/572 (65%), Gaps = 24/572 (4%)
Strand=Plus/Minus
Query 119939 ACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAA 119998
||| |||||||||||||| | |||||||||||| | || ||||||||| | | |||||
Sbjct 41196 ACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAA 41137
Query 119999 GCCGGGTAGAGCTCCTTTTTTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTACCAGa 120058
||||| | ||| ||||| || | || |||| | || || || ||
Sbjct 41136 ACCGGGCATCATACCTCTTTTC------TTCAACCAGAAGATGGAGGCGAAGGACCCGGA 41083
Query 120059 aaaaaaGACGCCTTCGACGATAGCAAAAGCGACCATGCGTTCGGCGAATGTGGCAGATTG 120118
||| ||||| ||||||| | || || ||||||| | ||| |||| ||||
Sbjct 41082 AAAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGGC 41023
Query 120119 ATTTTCGATCCATTTTTGAGCCCAAGCCGCCTTCTGCTTGACACTATCTAT-ATGCT--C 120175
| | ||||||| | | ||||| | ||||||| || | ||| ||| | |
Sbjct 41022 GTCCTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAGA---TTTCTGGGATGGTGTC 40966
Query 120176 GATCGCATTCAAAATCCTGTCGCATTCTTGGGGATCTTTAATGTATTCGACGA-CAAGAA 120234
||| || || || | |||| ||| | ||| || || ||||| | ||| ||| ||
Sbjct 40965 GATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAA 40906
Query 120235 TGTTATACATTTCCGTGTGAACACACTCAATGAATGTCTGTTGCGCATAGAAAAAACTAG 120294
| || |||| | ||| | ||| || |||| | | |||||| | |
Sbjct 40905 GGAG-TAGGTTTCGGAGTGGATGTTCTCGATCGCGATCTGGAACCCGTAGAAACTCTTGG 40847
Query 120295 CTTCCAAT-TCGGG--CACGGCGGATTGCATGTGCTCGATGATGTTAGTGTTCACGATGA 120351
| ||| || || | ||| ||| | || ||||| | ||| ||| |||||
Sbjct 40846 CCTCCGGGATCTGGACCTCGGTGGAG---AAGTTCTCGACCAAGTTTTCGTTGACGATAC 40790
Query 120352 CGTCGGCGGCAGCGAAAAACGCGAGAACGTGCTTAAGA--AAAAATCGTTCTTTATCGTT 120409
|||||| ||| ||||| || || || || || ||| || |||| ||| || |||||
Sbjct 40789 CGTCGGAGGCGGCGAAGAAGGCAAGCACT--CTGGAGATGAAGAATCTTTCGTTTTCGTT 40732
Query 120410 CAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTCGACTTTCCAGTG 120469
|| | | |||||||| |||| | ||||||||||| |||||| || ||| | |||||
Sbjct 40731 CATTCTGTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTCGGCAGTCCAGAA 40672
Query 120470 ACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501
| | | || |||||||||||||||||
Sbjct 40671 GGAGGCCTCGGCACGCTTGTACGATTGCCAGA 40640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478659725473840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |