Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq35 170 5e-37 seq57 156 1e-32 >seq35 Length=195003 Score = 170 bits (188), Expect = 5e-37 Identities = 1031/1639 (63%), Gaps = 41/1639 (3%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| | ||||| | | ||| ||||| || | || || || ||||| || Sbjct 50369 TTTACTCACGCCTCTCCAACTTTATTCAACGCTGGTACACCAAAGCCTCAAATGTCCTCC 50428 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 || || || | ||||||||| |||||||| || ||||||| ||||| | ||| | Sbjct 50429 TGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAAGGTATCTACGACACTTTGAAGGAA 50488 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726 |||||| | |||||||| | ||| || || |||||| || || ||||| |||||||| Sbjct 50489 TGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATTCACAACATTCGTGCA 50548 Query 363727 CAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 | ||||||| || || | |||| || || ||| | |||| ||| | || Sbjct 50549 ACCGGCTCTTACATTGCTGGTACGAACGGGACT-TCTAACGGGTTAATTCCTATGATCCG 50607 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 ||| || |||| ||||| | || || ||||||||||| ||| | || || || Sbjct 50608 TGTCTTCAACAACACTGCCCGTTATGTTGACCAGGGTGGTAACAAGAGACCTGGTGCCTT 50667 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AA 363904 |||| | ||| | ||||| || || ||||| || || || | || | | || || Sbjct 50668 TGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGACTTCATCGACATTAGAAAGAA 50727 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 ||| || || || ||| | ||||| | ||| | ||| || || |||||| | || | Sbjct 50728 TCAC-GGTAAGGAAGAAATCCGTGCGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATC 50786 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTT-TTGCCCACA-CGAATG 364022 ||| |||||||| || || | | | |||| | | || | || ||| || Sbjct 50787 TTTTCATGAAGCGTGTCGAAGAAAACGGCACTTGGACTTTATTCTCTCCTACATCG--GC 50844 Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082 |||||| | || | |||||||| | || || ||||| || ||| Sbjct 50845 TCCAGGCTTAAGTGACTGCTACGGTGACGAATTTGAAGCCCTATATACCCGTTACGAA-- 50902 Query 364083 GGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 | ||| | | | ||||||| || || || || | |||| | || |||| Sbjct 50903 --AAAGAAGGCCGTGGTAAGACTATCAAGGCCCAAAAATTGTGGTACTCTATATTGGAAG 50960 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | || | || || || ||||||| | | | ||||| ||| | || ||| | || |||| Sbjct 50961 CACAAACGGAAACTGGTACACCCTTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCA 51020 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACA 364261 |||| || || | ||| || || | ||| | || || ||| |||||||| Sbjct 51021 ACCAAAAGAACTTGGGTGTTATCAAGTCGTCTAACTTGTGCTGTGAAATTGTTGAATACT 51080 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT-- 364319 ||||||| || |||||||| || |||||| | || || | || | || || ||| | Sbjct 51081 CCGCTCCAGATGAGACTGCTGTTTGTAACTTGGCTTCTGTTGCTTTGCCAGCATTTATTG 51140 Query 364320 AA-------AAGATGG---------TACTTTTGACCACCAGCATCTTTATGACGTAACCT 364363 || |||| || ||| | | || | | | || |||| || | Sbjct 51141 AAACATCTGAAGACGGCAAAACTTCTACATATAACTTCAAAAAGCTACATGA---AATTT 51197 Query 364364 ATCATGCT---ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTG 364420 | | | | ||| | || | |||| ||||| ||| || |||||||| | | Sbjct 51198 CTAAAGTTATCACTCGTAACTTAAACAACGTTATTGACCGTAACTATTATCCTGTCGAGG 51257 Query 364421 AAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTG 364480 |||| | ||||||||| | || | ||||||| | | ||||| || || | |||| Sbjct 51258 AAGCAAGAAGATCTAATATGAGACACAGGCCGATTGCTTTGGGTGTCCAAGGTTTGGCTG 51317 Query 364481 ACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGG 364540 || ||| ||| || | | |||| || || || || || | ||||||| Sbjct 51318 ACACTTTCATGTTGTTGCGTTTACCATTCGACTCCGAAGAAGCACGCTTACTAAATATAC 51377 Query 364541 AGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCA 364600 | ||||||||||| ||||| ||| | ||| || || ||||| | || ||| Sbjct 51378 AAATCTTTGAAACCATGTACCATGCTTCCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAG 51437 Query 364601 AGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATC 364660 | || ||| || | | || || || ||| || || | | | || || || Sbjct 51438 ATGGCCCATACGAAACCTTCCAAGGCTCTCCAGCTTCTCAAGGTATACTTCAATTCGACA 51497 Query 364661 TATGGAATGTCACGCCAT-CTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAG 364719 | ||| | | | || | | || | ||| | |||||||| | | || | | | Sbjct 51498 TGTGGGACGAAAAACCTTACGGTATG-TGGGATTGGGATACTTTGAGAAATGACATCATG 51556 Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779 ||||||||| | | ||||| | | || || ||||| || || || ||| | ||| Sbjct 51557 AAGCATGGTGTTAGAAACTCTTTGACCATGGCACCTATGCCTACTGCATCCACTTCCCAG 51616 Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839 || | || |||||||||| |||||||| |||| ||| | || || || || ||| Sbjct 51617 ATTTTAGGTTACAACGAGTGTTTCGAACCAGTTACTTCCAACATGTACTCTCGTCGTGTT 51676 Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899 || || || ||||||| || || ||| ||| || | ||| | || || Sbjct 51677 CTATCTGGTGAATTTCAAGTCGTCAATCCATACTTACTGCGTGATTTGGTTGATTTGGGT 51736 Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959 | |||| ||| | |||||| | ||| | ||| | |||||||| | || | Sbjct 51737 ATTTGGGATGATGGTATGAAGCAATATCTAATCACACAAAATGGTTCCATTCAAGGTTTA 51796 Query 364960 CCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC-CATGCG 365018 ||| | ||| |||| |||| | | || || || || ||||||||||| || | Sbjct 51797 CCAAACGTACCACAAGAATTGAAAGATTTGTATAAGACTGTTTGGGAAATTTCACAAAAG 51856 Query 365019 AACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAA 365078 ||| ||||| | ||||| ||||| || | | || ||| ||| ||| || || || Sbjct 51857 -ACTATCATTAACATGGCAGCCGACCGTGCCGTTTACATCGATCAATCCCATTCTTTGAA 51915 Query 365079 CGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAA 365138 ||||| || | |||||| | ||||| ||| |||||||||||||| ||||| Sbjct 51916 TTTATTCTTGCGTGCCCCAACCATGGGTAAGCTAACAAGTATGCATTTCTACGGTTGGAA 51975 Query 365139 ATCCGGTCTTAAGACAGGT 365157 ||||| ||||| ||| Sbjct 51976 GAAAGGTCTAAAGACCGGT 51994 >seq57 Length=156688 Score = 156 bits (172), Expect = 1e-32 Identities = 574/882 (65%), Gaps = 23/882 (3%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||||| || || ||| || | |||||||| || | ||||| || || ||| | || Sbjct 58237 GAACGTCCCCAACATTTGGTCATGCGTGTGGCCCTAGGTATTCACGGCAGCGATATCGAG 58296 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAA 363565 ||| | | | || || || ||| | || | | | || ||||| ||||| | || | Sbjct 58297 TCCGTGCTGAAGACTTACAA-CTTG-ATGTCGTTGAGATACTTCACCCACGCTTCCCCCA 58354 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 || | | ||||| || || | |||| || ||||||||||| || || | |||| Sbjct 58355 CACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGA 58414 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 ||||||| ||||| || ||||| | ||||| | || | ||||| | |||||||||| Sbjct 58415 AGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGA 58474 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGC 363744 |||||| || ||||| | ||| ||||| |||| | ||||| | ||| ||| Sbjct 58475 CTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAG-GCTCTTATATTGCA 58533 Query 363745 GGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 || || || ||| || || ||| || |||||||| | ||||| || |||| ||||| Sbjct 58534 GGTACCAACGG-TACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGC 58592 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | ||||| ||||| ||||| ||| | || || ||||| | | | ||||| Sbjct 58593 ACGTTACGTGGACCAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCC 58652 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACAC-GGGAAAAGAGGAAT 363922 ||||| || || || || ||| | || | | |||| || | || || || ||| Sbjct 58653 ATGGCATGCAGACATCTTCGACTTTGTCGATAT-CAGAAAGACTCATGGTAAGGAAGAAA 58711 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 | |||||| | ||| ||||| ||| || ||| || | || | ||| |||||||| || | Sbjct 58712 TTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCCGATCTTTTCATGAAGCGTGTCG 58771 Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATG----TCCAGGTCTTTCCGAT 364038 | | | | | ||| | ||| | | ||| | | || |||||| | ||| Sbjct 58772 AAGAGGATGGGGCCTGGAC---CTTATTCTCAC-CAAGTGCTGCCCCAGGTTTGGACGAC 58827 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC-TCG 364097 || |||||||| || | | | ||||| || ||| || ||| | | | | Sbjct 58828 GTTTGGGGTGAAGAATTCGAAGAGCTATATACCCGTTACGAA----AGAGAAGGTCGTGG 58883 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 ||| || || || || ||| |||||| |||||| || | | || | || || || Sbjct 58884 TAAAACCATCAAGGCTCAAAAGGTATGGTACGCCATCTTGCAAGCACAAACAGAAACCGG 58943 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 ||||||| ||| | || || ||| | || ||| | ||| ||||||| ||| |||| || Sbjct 58944 TACACCCTTCATGGTTTATAAGGATGCCTGTAACAGAAAGACCAACCAACAGAACCTGGG 59003 Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 ||| || | | ||| | ||| ||| || | || || | | || || || || Sbjct 59004 TACCATCAAATCGTCAAACTTGTGTTGCGAAATCGTCGAGTATTCTTCCCCAGATGAAAC 59063 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 ||| || ||||| | || || || || || || || || || Sbjct 59064 TGCTGTTTGTAATTTAGCTTCCATTGCTCTACCAGCATTCGT 59105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346135449554