Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq224 93.3 3e-14 seq201 86.0 5e-12 >seq224 Length=1007144 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||| || || |||| || || || || |||||||| |||||||| || | | Sbjct 62511 CCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGAC 62570 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || ||||| ||||| || ||| |||| | | ||||||||| ||| Sbjct 62571 AGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGA 62630 Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || || ||||| || || || |||||| | | | | ||||| | || Sbjct 62631 ATACCTTCCTTGTCCTGGATCTTACT-CTTCACATTGTCTATGGTGTCAGAAGATTCGAC 62689 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || || || || || |||||||||||||||||||| Sbjct 62690 CTCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 62737 >seq201 Length=186330 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| || | ||| | ||||| |||||||| ||||||||||| | || |||| | || Sbjct 47028 CTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 46969 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || |||||||| || || ||| | || | | |||||||| ||| | || || ||| Sbjct 46968 TCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTG 46909 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||| | ||| || | | | | |||||| | || ||||| |||||| Sbjct 46908 TCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 46849 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAA 16927 || || || |||| |||||||||||| Sbjct 46848 GTCTTACCAGTCAAAGTTTTGACAAAA 46822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405085793156530