Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq257 264 2e-65 >seq257 Length=84383 Score = 264 bits (292), Expect = 2e-65 Identities = 591/873 (68%), Gaps = 26/873 (3%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCAT-GTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 ||| || |||| || |||||| | || ||||||| || || |||| |||||| || Sbjct 40624 ATCCAGTACCACGAGATCTGG-CAATCGTACAAGCGTGCCGAGGCCTCCTTCTGGACTGC 40682 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTC---ACTGTCTGAGAACGA 42400 |||||| || ||| || ||||||||| || |||| | | || || ||||| Sbjct 40683 CGAGGAAATCGACTTGTCCAAGGACATCCACGACTGGAACAACAGAATGAACGAAAACGA 40742 Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460 || || ||| || | | || ||||||||||||||||| ||||| || ||||| || Sbjct 40743 AAGATTCTTCATCTCCAGAGTGCTTGCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGA 40802 Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGG 42520 ||| ||| | | ||| | ||||| ||| | ||||| | |||||||| Sbjct 40803 AAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAGGCCAAGAGTTTCTACGG 40862 Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTA 42580 |||||||| || || |||||| | ||||| || ||| || || || |||| || Sbjct 40863 GTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTCCTTGTTGATCGACACCTA 40922 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 |||| ||| ||| || | | ||||||| ||||| || || || || || Sbjct 40923 CATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCATCGACACCATCCCAGAAAT 40982 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700 | ||||||| || ||||| || | |||||| || |||| || |||||| || Sbjct 40983 CTGCGAGAAGGCCGAATGGGCCCTTAGATGGATCCAGGACGCCGATGCCCTGTTCGGTGA 41042 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 || ||||| || || || || |||| || ||||||| || || ||||||||||||| Sbjct 41043 AAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTTTCCGGGTCCTTCGCCTCCAT 41102 Query 42761 CTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCA 42819 ||||||| | ||| | | |||| | ||||||||| | |||||||| |||||||| ||| Sbjct 41103 CTTCTGGTTGAAGAAAAGAGGTAT-GATGCCCGGTTTGACCTTCTCCAACGAACTGATCT 41161 Query 42820 GCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 |||| ||||| || |||| | ||||||||||| | ||||| | |||| | | Sbjct 41162 GCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGC---CCACTTGAAAA 41218 Query 42880 ACAAGCCCTCGAAGGAGC--GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGA--G 42935 ||||||| || ||| ||| | ||| |||| |||||||| |||||||| Sbjct 41219 ACAAGCC--GGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACA 41276 Query 42936 AAG-GAGTTCCTCACGCAGTCGC--TGCCCGTGTCCCTGGTCGGCATGAACCACGACCTC 42992 ||| | ||||| || ||| |||| || || || | || |||||| |||| | Sbjct 41277 AAGATACTTCCT-----AGACGCCTTGCCAGTCGCCTTGCTAGGTATGAACGCCGACTTG 41331 Query 42993 ATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC 43052 ||| | | ||| || ||| |||||| ||| || || | | ||| || Sbjct 41332 ATGAACCAATACGTCGAGTTCGTCGCAGACAGACTTTTGGTCGCCTTCGGTAACAAGAAG 41391 Query 43053 CTCTACAA-CACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGAC 43111 |||||| || | ||||||||| || ||||| ||||| || |||| || ||||| Sbjct 41392 TACTACAAGGTCGAC-AACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGAC 41450 Query 43112 CAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 |||||| ||||| ||| | ||| |||||||||| Sbjct 41451 CAACTTCTTCGAAAAGAGAGTCTCCGACTACCA 41483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333923504720