Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq50 861 0.0 seq75 372 9e-99 seq336 275 2e-69 seq410 127 6e-25 >seq50 Length=1952 Score = 861 bits (954), Expect = 0.0 Identities = 884/1170 (76%), Gaps = 2/1170 (0%) Strand=Plus/Minus Query 42048 CGTCGAGCCAGGTCGGGTAGGCGACGGGGCGCTCGTAGACCGGGCCGTCGACGGCGACCG 42107 |||| |||| | |||| ||| ||||| | ||| |||||||| ||| ||||| | Sbjct 1881 CGTCCTGCCACGACGGGCGCGCGTACGGGCGGTGGTACACCGGGCCCTCGTGCGCGACGG 1822 Query 42108 TGGACGGGTCCACGTCGACGATCCGCTCTCCCTGCCAGTCGATGACGAGACGGCCGTCGC 42167 | |||||| ||||||||||| ||||| || || |||||| || || ||| | Sbjct 1821 TCCGCGGGTCGACGTCGACGATGCGCTCGCCGTGGTGGTCGATCGTCAGGCGCCCGGAGT 1762 Query 42168 CGGTGACCTCGCCGAGCACGGAGGTCTCCACCTCCCACTTGCCGGTGACGGCGAGGAACG 42227 || |||||||||||| |||| |||||| || ||||||||| |||||| |||||||||| Sbjct 1761 CGTTGACCTCGCCGATGACGGCGGTCTCGACGTCCCACTTGGCGGTGATGGCGAGGAACT 1702 Query 42228 CGTCGAGCTTCGCAGGCGAGACGATGGCCATCATCCGCTCCTGCGACTCCGACATGAGGA 42287 ||||||||||| | |||| ||||| |||||||| |||||||||||||| |||||||||| Sbjct 1701 CGTCGAGCTTCTCCGGCGCGACGACCGCCATCATGCGCTCCTGCGACTCGGACATGAGGA 1642 Query 42288 TCTCCTCGGCCGTGAGCGAGGGGTCGCGGAGGAGCACGTTGTCGAGCGAGACGTGCATTC 42347 |||| | || |||||| |||||||| || || |||| ||||||| | |||||||| | Sbjct 1641 TCTCGCCCGCGTTGAGCGTCGGGTCGCGCAGCAGGACGTCGTCGAGCCACACGTGCATGC 1582 Query 42348 CGCTGTTGCCGTTGGCGGCGAGCTCGCTCGTGGCGCAGGAGATGCCTGCAGCCCCGAGGT 42407 ||| || |||||| | ||||||||| ||| ||||| |||||||| || || ||||||| Sbjct 1581 CGCCGTCGCCGTTCGAGGCGAGCTCCGACGTCGCGCACGAGATGCCGGCGGCACCGAGGT 1522 Query 42408 CCTGGATCGCCTCGACCAGCT-CGTCGCGGTACAGCTCCAGGCAGCACTCGATGAGCACC 42466 ||||||| |||| || | || || |||| || ||||| ||||||||||||||||| ||| Sbjct 1521 CCTGGATGCCCTCCACGACCTGCGCCGCG-TAGAGCTCGAGGCAGCACTCGATGAGGACC 1463 Query 42467 TTCTCGGCGAAGGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 42526 ||||| |||||||| Sbjct 1462 TTCTCCATGAAGGGGTCGCCCACCTGGACGCTCGGGCGCTTGGCGGGCACGCCGTCCTCG 1403 Query 42527 NNNNNNNNNGAGGCGAGGATCGACGCGCCGCCGATCCCGTCACCCCCCGTGCGCGCCGCG 42586 |||||||||||||| || |||||||| ||||| || |||||||| || || Sbjct 1402 AACGTCTCCGAGGCGAGGATCGAGGCACCGCCGATGCCGTCGCCGCCCGTGCGGGCGCCG 1343 Query 42587 AAGAGGACGACCTTGTTGCCTAGGCCCGTCGCGTTGGCGAGCTTGAGGTCCTCGTGCCGG 42646 || || |||||||||||||| | ||||| ||||||||||| | || ||||||||| || Sbjct 1342 AACAGCACGACCTTGTTGCCGACGCCCGAGGCGTTGGCGAGGTGGATGTCCTCGTGGCGC 1283 Query 42647 AGCACGCCCACCGCCAGGGCGTTGACCAGCGGATTGGCCTGATAGACGGCATCGAACACG 42706 |||||||| | ||| |||||||| || || ||| |||| || || ||||| ||| Sbjct 1282 AGCACGCCGAGGCACAGCGCGTTGACGAGAGGGTTGCCCTGGTACGAGGAGTCGAAGACG 1223 Query 42707 GTCTCGCCGCCGATGTTCGGCAGACCGAGGCAGTTGCCGTAGAAGCTGATGCCGCTGGTG 42766 ||||||||||||||||||||| ||||||| |||||||||| || || |||||| | Sbjct 1222 AGCTCGCCGCCGATGTTCGGCAGGCCGAGGCTGTTGCCGTAGCCGCCGACGCCGCTCACG 1163 Query 42767 ACGCCGTGCACGACCCGCGCCGTGTCGGGGTCGTCGGCCGCGCCGAAGCGCAGGGCGTCC 42826 |||||||||||||| ||||||||||| |||| |||| | ||||||||||| || |||| Sbjct 1162 ACGCCGTGCACGACGCGCGCCGTGTCCGGGTGGTCGACGGCGCCGAAGCGGAGCTGGTCC 1103 Query 42827 ATGACCGCGACCGGGCGAGCGCCCATGGAGATGATGTCGCGGACGATGCCGCCCACACCC 42886 ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct 1102 ATGACGGCGACGGGGCGCGCGCCCATGGAGATGATGTCGCGCACGATGCCGCCGACACCC 1043 Query 42887 GTCGCCGCGCCCTGGAAGGGCTCGATGAACGAGGGGTGGTTGTGACTCTCCGCCTTGAAC 42946 ||||| ||||||||| ||||||||| |||||| ||||||||||| ||| |||||||| Sbjct 1042 GTCGCGGCGCCCTGGTAGGGCTCGACGAACGACGGGTGGTTGTGCGACTCGACCTTGAAC 983 Query 42947 GTGACCGCCCATCCCTCGCCGACGTCGATGACGCCCGCGTTCTGCCCCATCCCGACCATG 43006 || || ||||| || || |||| ||||| |||||||||||||| || || ||||| | Sbjct 982 GTCACGGCCCAGCCGTCACCGATGTCGACGACGCCCGCGTTCTCGCCGATGCCGACGAGC 923 Query 43007 AGGCGCTCGCGCATCTCGTCCGAGACCTTCTGCCCGAACCTCTTGAGGTAGAGCTTGCTC 43066 ||| ||| ||||||||||| | | | |||||| || |||| || |||| | Sbjct 922 AGGTGCTTCTTCATCTCGTCCGTGGTCGCCGCGCCGAACTTCGACAGGTGGACCTTGGAC 863 Query 43067 GACTTGTAGGAGCAGTGCTCCGACCACATCACCGAGTACATCGCCAGCTCGCCCGAGGTG 43126 |||||||| ||||||||||| |||||||| || ||||||||||| ||||| | | ||| Sbjct 862 GACTTGTACGAGCAGTGCTCGGACCACATGACGGAGTACATCGCGAGCTCCGCGGCCGTG 803 Query 43127 GGGCGGCGGCCGAGGATCTCCTTGATCCTCGCGTACTCGTCGTCCTTGAGGCCCAGCGCC 43186 |||||||| || ||||| || ||| | | ||||||||| ||||||||| ||| | Sbjct 802 GGGCGGCGCCCCAGGATGTCGCGGATGCGCTGGTACTCGTCTGGCTTGAGGCCGAGCTCG 743 Query 43187 GCGTAGGGCTGCTCCTTCTCCGGAGTCGCG 43216 ||| | ||||| ||| || || || ||| Sbjct 742 GCGAACGGCTGGACCTCGTCGGGCGTGGCG 713 >seq75 Length=1821 Score = 372 bits (412), Expect = 9e-99 Identities = 630/902 (70%), Gaps = 27/902 (3%) Strand=Plus/Minus Query 43905 GGCTTCCTCCTGTTGGGCGACAGCTGGTTCCAGCTCCTTATCGCCGCCGCTCTCGGCATC 43964 || ||| |||| |||||||| |||||||||||||| |||||| || |||||| | Sbjct 983 GGGTTCGTCCTCCTGGGCGACTCGTGGTTCCAGCTCCTCGTCGCCGGGGCGCTCGGCCTG 924 Query 43965 CTGTTCACCCAGGTGGCTTTCCTCGCGCACGAGGCGGCACACCGGCAGATNNNNNNNNNN 44024 | |||||||| | || ||| |||||||||||||| | ||||| ||| | Sbjct 923 ATCCTCACCCAGTTCGCGTTCGTCGCGCACGAGGCGTCGCACCGCCAGGTCTTCGCGTCC 864 Query 44025 NNNNNNNNNNNCCTTCGGCTCGCGAGGGTCCTCGGC---GGGATCGTCGGCATGAGCTAT 44081 | || |||| || ||| || | | || |||||||||| ||| | Sbjct 863 GGCCCGGCGAACGACCGCCTCGGGAAGGTGCTGGCCAACGGCGTCGTCGGCATCAGCCAC 804 Query 44082 TCCTGGTGGGACTCGAAGCACACGCGGCACCATGGCAACCCGAATCGTGTCGGCAAGGAT 44141 || |||||| ||||||||||| ||||| | |||||||| || ||||||||| Sbjct 803 TCGTGGTGGATGAACAAGCACACGCGCCACCACGCGAACCCGAACCGCCGCGGCAAGGAC 744 Query 44142 CCTGATATCGAGGTTGATACGATCTCGTTCCTCGACGAGGACGCCTCCCGATCGCGTGGC 44201 || || |||| | || || ||||||||| |||||||| | ||||| | Sbjct 743 CCGGACATCGCGCCCGACGTCGTCGTGTTCCTCGAGGAGGACGCGGA--GGTCGCGAAGG 686 Query 44202 GTCGTCCGATTGATCACGA---GGAAGCAGGGATGGCTGTTCTTCCCCCTCCTGACGCTA 44258 | | |||| | ||| | | | ||||| |||||||||||||| ||||| ||||| Sbjct 685 G-CTTCCGGGCGGTCATCAACCGCTACCAGGGCTGGCTGTTCTTCCCGCTCCTCACGCTC 627 Query 44259 GAGGGCATCAATCTCCACGCCTTGAGCGTCCGACAC-CTTCTCTCCTCGCACCCG-GTTC 44316 |||||| | || || |||| | |||| | | | || ||| || || ||| | | Sbjct 626 GAGGGCGTGAACCTGCACGTGCAG-GCGTTCCGCTCGCTCCTCGCCG-GCGGCCGCGCGC 569 Query 44317 GTGGC--CGCTGGCAAGAGC----TGGGGATGCTCGCCGTG-CGATTCTCG-GCCGTGCT 44368 | ||| || ||| | || | | ||| || || | || | | | | || || Sbjct 568 GCGGCGACGTCCGCACGCGCGTCATCGAGATCGTCACCATCACGCTGCGCCTGTCGCTCT 509 Query 44369 -CGTCCCGGTGTTTCTCATGCTCC---CTCTTGGCATGGCGTTCGCCTTCATGGGCGTCC 44424 |||| || | | || | ||| | || ||| | || ||||||| ||||||||| Sbjct 508 ACGTCGGGGCGGTCGTCTGGTTCCTGCCGCTCGGCCTCGCAGCCGCCTTCCTGGGCGTCC 449 Query 44425 AGCTCGCCGTCTTCGGCGTGTACATGGGGGCCTCGTTCGCTCCGAACCACAAGGGCATGC 44484 ||||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||| Sbjct 448 AGCTCGCCGTCTTCGGCGTCTACATGGGGGCGTCGTTCGCCCCCAACCACAAGGGCATGG 389 Query 44485 CGATCATCGCGTCCGATGCCCGCCTCGACTTCTTCACCAAGCAGGTGGGCACCTCCCGCA 44544 |||||||| | |||| | |||||||| | |||||||||| |||||| || | Sbjct 388 CGATCATCCCCGCCGACAGCAAGATCGACTTCCTGTCCAAGCAGGTCCTCACCTCGCGGA 329 Query 44545 ACATACGCGGAGGCTGGTGGGCCACCTGGCTCATGGGCGGGCTGAACTACCAGATCGAGC 44604 |||| ||||| || |||||| | | |||||||||||||| |||| ||||||||||| Sbjct 328 ACATCCGCGGCGGGTGGTGGATGAACATCCTCATGGGCGGGCTCAACTTCCAGATCGAGC 269 Query 44605 ACCACCTCTTCCCCAGCATGCCTCGGATCCATCTGTCCCAGGCAAGGAAGATCGTGCGCG 44664 ||||||| ||||| |||||||| || || || | | ||| | |||||||||||| Sbjct 268 ACCACCTGTTCCCGAGCATGCCGCGCCCGCACCTCGCGCGGGCCCGCGAGATCGTGCGCG 209 Query 44665 AGCACTGCACCGCAAA-CGACGTGCCGTACACCGAGACCACACTGCTTCGGTCATACGCC 44723 |||||||| | ||| || | |||||||||| ||||| | || | | ||| ||||| Sbjct 208 AGCACTGCGC-GCACCTCGGCCTGCCGTACACGGAGACGAGCCTCGTGCAGTCCTACGCG 150 Query 44724 ATCGTGATCGACTACCTCAACCGCGTCGGCCTGGCAGCGCGCGACCCCTTCGACTGCCCC 44783 ||||| || |||||||||||||| || || | ||||||||||| ||||||||||| Sbjct 149 ATCGTCGTCCGGTACCTCAACCGCGTGGGGCTCTCGGCGCGCGACCCGTTCGACTGCCCG 90 Query 44784 AT 44785 || Sbjct 89 AT 88 >seq336 Length=6918 Score = 275 bits (304), Expect = 2e-69 Identities = 282/362 (78%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 11006 ATGGCAGGGGAGACCGTGATCACGGTCGTGGGGAACCTCACTGCAGACCCTGAGCTGCGT 11065 |||||||| || ||||| |||||||| | ||||||||||| | |||||| ||||||||| Sbjct 1387 ATGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGT 1328 Query 11066 TACACGCAGAACGGGCTGC--CGGTGGCGAACTTCACCATCGCATCGACGCCGCGCACCT 11123 | ||| | |||| ||| ||||||| |||||||| | || || |||||||| |||| Sbjct 1327 TTCACCCCCT-CGGG-TGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCT 1270 Query 11124 TCGACCGTCAGGCGAACGAGTGGAAGGACGGCGAAGCGCTGTTCCTCCG-TGCGTCCGTG 11182 ||||||| ||| ||||||||||||||||||| || | |||||| | || ||| || | Sbjct 1269 TCGACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGC-TCGATC 1211 Query 11183 TGGCGCGAGTTCGCGGAGCACGTGGCGGGTTCGCTGACCAAGGGCATGCGGGTCATCGCA 11242 ||||||||| ||||||| |||| |||| |||||||| ||||||||||| ||||||| Sbjct 1210 TGGCGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTG 1151 Query 11243 TCCGGACGCCTGAAGCAGCGCTCCTACCAGGACCGCGAGGGCAACAACCGCACCGCGATC 11302 || ||||| |||||||| ||| || ||||||||| | || ||||||| || Sbjct 1150 CAGGGCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTC 1091 Query 11303 GAGCTCGAGGTGGACGAGATCGGCCCGAGCCTCCGCTACGCGACGGCGCAGGTCACCCGG 11362 ||||| |||||||||||||||| || ||| |||||||| | || |||||||||| Sbjct 1090 GAGCTGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGCCAAGGTCACCCGC 1031 Query 11363 GC 11364 || Sbjct 1030 GC 1029 >seq410 Length=2856 Score = 127 bits (140), Expect = 6e-25 Identities = 268/393 (68%), Gaps = 20/393 (5%) Strand=Plus/Plus Query 44409 GCCTTCATGGGCGTCCAGCTCGCCGTCTTCGGCGTGTACATGGGGGCCTCGTTCGCTCCG 44468 || ||| | | ||| |||||||| ||||||||| | | || | | ||||||| ||| Sbjct 809 GCGTTCCTCGCCGTGCAGCTCGCGGTCTTCGGCATCCTGCTCGGCGGCGCGTTCGCACCG 868 Query 44469 AACCACAAGGGCATGCCGATCATCGCGTCCGATGCCCGCCTCGACTTCTTCACCAAGCAG 44528 ||||| ||||||||||||||| || || | ||| | |||||||| | | ||| Sbjct 869 AACCATAAGGGCATGCCGATCGTCCCGGCGACTGCGGACGTCGACTTCCTGCGCCGCCAG 928 Query 44529 GTGGGCACCTCCCGCAACATACGCGGAGG-CTGGTGGGCCACCTGGCTCATGGGCGGGCT 44587 || || ||||||||||| ||||| || | ||| | | | || |||||||||| || Sbjct 929 GTCCTCATGTCCCGCAACATCCGCGGCGGCCCGGTCGTCGA-CTTCTTCATGGGCGGCCT 987 Query 44588 GAACTACCAGATCGAGCACCACCTCTTCCCCAGCATGCCTCG---GA---TCCATC-TGT 44640 ||| |||| | ||||||||||| ||||| |||||||| || || || | | ||| Sbjct 988 CAACCGCCAGGTGGAGCACCACCTGTTCCCGAGCATGCCCCGCCCGAACCTCAAGCGTGT 1047 Query 44641 CCCAGGCAAGGAAGATCGTGCGCGAGCACTGCACCGCAAACGACGTGCCGTACACCGAGA 44700 || || ||||||||||| ||||| || || |||| | ||||||||| Sbjct 1048 CC-------AGACCCTCGTGCGCGAGTACTGCTCCCAGCTCGGCGTGACCTACACCGAGG 1100 Query 44701 CCACACTGCTTCGGTCATACGCCATCGTGATCGACTACCTCAACCGCGTCGGCCTGGCAG 44760 | | || || ||| ||||| || | ||||||||| |||| || || | Sbjct 1101 TCGGGTTCTTTACCTCCTACCGGATCGTCGTCCAGTACCTCAACGACGTC--CCCGGACG 1158 Query 44761 CG--CGCGACCCCTTCGACTGCCCCATTACCGC 44791 || ||||| || ||| ||||||| | |||| Sbjct 1159 CGCCCGCGATCCGTTCTCCTGCCCCCTGGCCGC 1191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148245613089578