Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_009816.1
Length=70579
Score E
Sequences producing significant alignments: (Bits) Value
seq373 275 3e-69
>seq373
Length=3671
Score = 275 bits (304), Expect = 3e-69
Identities = 668/996 (67%), Gaps = 32/996 (3%)
Strand=Plus/Plus
Query 59910 TCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGAACCTCTGCGATGGTCTGGAAC 59969
|| |||||||| | ||| || ||||| ||||| ||||| | ||| ||||| ||||||||
Sbjct 1352 TCCTCGAACATGATGTACGGGTAGCCGGACTCGAACTGGAGCTCGGCGATCGTCTGGAAG 1411
Query 59970 AGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCATCTTTTAGCCACGTGTCGTAC 60029
| | || || | ||| ||||| ||| | || | | | | |||||||
Sbjct 1412 AAGTCGCGCGCCTTGATCTTCGTCTTGCGGATGCGCGAGTCGTCGACCATCTCGTCGTAC 1471
Query 60030 ATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTACACCTTATTGATGTCATAAGGA 60089
||||||| | |||| |||| | | ||| ||||| || | || ||| || ||
Sbjct 1472 TTCTCGGTGATCGAGATGTCGGCGAACGGCTTGCCGTAGACGCGCTCGACGTCGTACGGC 1531
Query 60090 GAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATCAGGAACGATA 60149
||||| ||| ||| |||| ||| ||| || || |||||||| || || | |
Sbjct 1532 GAGAAGAGGTACATGTCCTCGTTCTTCTTCGCGAGCTCGAACGTGATGTCCGGGATCACG 1591
Query 60150 ACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTATCC 60209
|| || || || || ||||| || |||||||||||||| ||||| || |||||||| ||
Sbjct 1592 ACGCCGAGCGACAGCGTCTTGATGCGGATCTTCTCGTCCGCGTTCTCGCGCTTGGTGTCG 1651
Query 60210 AGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGCCTT 60269
|||||| | ||||||||||||||| |||| || || || || || |||||||| |
Sbjct 1652 AGGAACCGCATGATGTCGGGGTGGTGCGCGTGCAGGTACACGGCACCGGCGCCCTGGCGC 1711
Query 60270 GCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATGACT 60329
|| || || ||||| | ||||||||| || || || | ||||||||| ||||||||
Sbjct 1712 GCGCCGAGCTGGTTCGCGTAGGAGAACGAGTCCTCGAGCAGCTTCATCACGGGGATGACG 1771
Query 60330 CCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAGCTCCTGCCTCGCGGAGGTTGGAGA 60387
|| || | ||| ||||||| ||| || || || || |||||||| ||| || |
Sbjct 1772 CCGGACGACTG--GTTCTCGATGTGCTTGATGGGCGCGCCGTGCTCGCGGATGTTCGACA 1829
Query 60388 ATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAGAGAGTCCTGAACGATTCGAC 60447
| | |||| ||||| || ||||| || ||||| || | | | | | ||
Sbjct 1830 GGAGCAGGGCGACGCCGCCGCCGCGCTTGGAGAGCTGCAGCGCGGAGTTGATGCCGCGCG 1889
Query 60448 CGATGGACCCCATGGTGTCCTGAACATCGAGGATGAAGCATGATACTGGCTTGCCTGCGT 60507
|||||||| ||||| |||||| | || | |||||| || || |||| ||| |||
Sbjct 1890 CGATGGACTCCATGTTGTCCTCGATGCGCAGCAGGAAGCACGACACGGGCTCGCC-GCGC 1948
Query 60508 CGAGAAGCCCCG-CGTTGAGGAAGGTCGGAGTTGCAGGCTGGAAGATTCCCTTGATAATG 60566
| | ||| |||||||||| || || || || ||||||||| ||| || |||
Sbjct 1949 TGCGCCTTGCCGACGTTGAGGAACGTGGGGGTCGCGGGCTGGAAGCGGCCC--GA-GATG 2005
Query 60567 AGATCCACAAGGGACT-CAGCGTGCTCGAAGTCTTCGCTGTAGTGGATGGCCGTGAG-TA 60624
| ||| | | | | ||||| | | || | || || | || ||||| | | |
Sbjct 2006 ACCTCCTCGACGATGTCCAGCGCG-GCCTGCTCGTTGCCGTCGGCGA-GGCCGAGCGCGA 2063
Query 60625 CC------ACTCGATCTTCGTAGCGCTCGTAATAGCGCTTGCCATCGTTAGTCTTCAAGG 60678
|| || || || ||| |||||||| |||||||| || ||| ||||| | |
Sbjct 2064 CCATGCAGACGCGGTCCTCGAAGCGCTCGAGGTAGCGCTTCCCGTCGAACGTCTTGAGCG 2123
Query 60679 CGTAGGAGTTATAGAACTTCAGCGCTCCCATGTAGGTCTTGAAGCGGAACTTGTGTCCGT 60738
||| || | ||| |||| | || || | | | |||| |||||||||||| | |||
Sbjct 2124 TGTACGACGTGTAGTACTTGAAGGCGCCGAGGAACGTCTCGAAGCGGAACTTCTTCGCGT 2183
Query 60739 AGGCCTGTTTCATGAGTCTCTTTAGGTCCTCGAAGCCGTA----GCGAAGGACGACATCC 60794
|||| | | | ||| | | |||| | |||| ||| |||||| ||
Sbjct 2184 AGGCGAACTCGAACAACGACTTCACGAACTCGCGGTCGTACTTCGCG-AGGACG---GCC 2239
Query 60795 TTGTCCCA-TAGTTGGACTTCCTCTGTGAGGTGATCCACCTTCTCCTCTAGGGAGTGAAA 60853
||| | || ||| | ||| ||||| |||| ||||||| | ||| ||| ||
Sbjct 2240 GGGTCGTAGTACTTG----TTCTCGACGAGGTAGTCCAGCTTCTCCGCGAGGTCGTGGAA 2295
Query 60854 GAATACGGTGTTCTTGTTGACGTGCTCCAGGAAGTA 60889
||| |||||||||| ||||||||||| |||||||||
Sbjct 2296 GAAGACGGTGTTCTGGTTGACGTGCTGCAGGAAGTA 2331
Score = 158 bits (174), Expect = 5e-34
Identities = 288/417 (69%), Gaps = 10/417 (2%)
Strand=Plus/Plus
Query 58400 GCAGCTTAGGCAACCTTCCACTTCCGTGCCTTCTA---CCGACTTAGCAGAGGTTCGGAT 58456
|||||| | |||||| || || |||||||| || | || || | | |||| |||||
Sbjct 325 GCAGCTGACGCAACCCTCGACCTCCGTGCCCTCCAGGGCCATCTGA-CGGAGG--CGGAT 381
Query 58457 GTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAATGTCTCG 58516
|||||| || | ||| | |||||| |||||||||||||| ||||| | ||| ||
Sbjct 382 GTAGTAGAGCGTCTTGATGCCCTTGCGCCACGCGTAGATCTGCGCGCGGTTGACGTCGCG 441
Query 58517 CGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCCAAGGAGA 58576
||| || | || || ||||||||||||||| || |||||||| || | |
Sbjct 442 CGTCGTGACCGTGTCCTTGAAGAACAGCGTGAGGCTCAGACCCTGGTCGACGTGCTGCGT 501
Query 58577 TGCTACAGCGTACATATCAATGATCGGGT--TAGGTCCGATAGCGTAAGCGCTATCAATT 58634
|| | |||||| | || |||||| | ||| ||||| |||| ||| ||
Sbjct 502 CGCGGCGGCGTACGTGTCGATGATCTTCTCGTAG--CCGATCTCGTACGCGTCCTCGTAG 559
Query 58635 GATTCTACATTCTCATTGGTCACTCCGTACTGAGGGTAATAGACTCGACCAAGCTTACCC 58694
| || | || || || |||| | | ||||| ||||| || || | ||| |||
Sbjct 560 TACTCGAGGTTGTCGTTCGTCAGGTAGGGCGCCGGGTAGTAGACGCGCCCGATCTTGCCC 619
Query 58695 TCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGCATGGTTAATG 58754
|||||||| | ||| | || | ||| ||||| ||||||| ||| | | ||| |||
Sbjct 620 TCCTTGCGGATCTCGATCTTCGACGGCACCGGGTGGATCGAGGACGTCGAGTTGTTGATG 679
Query 58755 TACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAGGTTCTGGTTGTAAATACCATGC 58811
|| ||||| ||||| || || |||| |||||||||||||||||||| || || |||
Sbjct 680 TAGGAGATCGAGCCCGTCGGCGGGACGGCCTGGAGGTTCTGGTTGTAGATCCCGTGC 736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 225726770276180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |