Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq224 113 1e-19
>seq224
Length=1007144
Score = 113 bits (124), Expect = 1e-19
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | || || || || | |||| ||| ||| ||||| || || || || |
Sbjct 62739 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGAC 62798
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
||||| | |||||||| | |||||| || ||||| |||| | |||||| ||
Sbjct 62799 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 62858
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || ||||||||||| | || ||||| || |||| ||| ||||| ||
Sbjct 62859 ATGCCTTCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACC 62918
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || ||||| || ||||| ||||||||||| || |||||
Sbjct 62919 TCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 62965
Score = 98.7 bits (108), Expect = 2e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | || || || || | |||| ||| |||||||| || || || || |
Sbjct 62283 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGAT 62342
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
||||| | |||||||| | |||||| || ||||| |||| | |||||| ||
Sbjct 62343 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 62402
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || |||||||| || | || ||||| || || | || |||| ||
Sbjct 62403 ATACCTTCCTTGTCCTGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACC 62462
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || ||||| ||||||||||| ||||| || ||||||||
Sbjct 62463 TCCAAGGTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 62509
Score = 93.3 bits (102), Expect = 1e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || ||||| | | || | |||||||| ||||| || || || |||
Sbjct 461527 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAG 461468
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||||| | ||| || ||||| || || || || || | || || ||
Sbjct 461467 ATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACATTG 461408
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || ||||| ||||| || || || ||||| ||||| | ||||||||||
Sbjct 461407 TCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACG 461348
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 461347 AAAATTTGCAT 461337
Score = 86.0 bits (94), Expect = 1e-11
Identities = 152/227 (67%), Gaps = 24/227 (11%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| || || | |||| || ||| ||||| || |||||||| |
Sbjct 61851 CCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTATAGTCTGAC 61910
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
||||| | || ||||| | |||||| ||||| || |
Sbjct 61911 AGCGTTCTACCATCTTCCAGTTGTTTCCCTGC-AADA----------------------- 61946
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || |||||||| || | || ||||| || |||| ||| ||||| |||
Sbjct 61947 ATACCTTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATAGTATCAGAGGATTCGACT 62006
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| || || || ||||||||||| ||||||||
Sbjct 62007 TCCAGTGTGATGGTCTTACCAGTTAGTGTCTTGACGAAAATCTGCAT 62053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179647643898066
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |