Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq35 168 8e-37 seq418 86.0 7e-12 >seq35 Length=195003 Score = 168 bits (186), Expect = 8e-37 Identities = 770/1206 (64%), Gaps = 30/1206 (2%) Strand=Plus/Minus Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162 |||||| || || || || |||||||| || ||||| || || | || || |||||||| Sbjct 51502 CCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGG 51443 Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 114222 ||| || | || | || | || || | || || || ||||| || ||||| Sbjct 51442 GCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACATGGTTTCAAA 51383 Query 114223 AATGCGAGCATTCATT--GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATA 114280 || | ||| | | || | || || ||||| || || | | || |||| || Sbjct 51382 GATTTGTATATTTAGTAAGCGT--GCTTCTTCGGAGTCGAATGGTAAACGCAACAACATG 51325 Query 114281 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 114340 || || || | |||||||||||| | |||| || | |||||||||||||| || Sbjct 51324 AAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATATTAGATCTT 51265 Query 114341 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 114400 | || ||| || |||||| | || | || ||||| | |||| || |||| | Sbjct 51264 CTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTGATA 51205 Query 114401 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA--- 114451 || || | |||||||| ||||||| | | | | | | ||| | ||||| Sbjct 51204 ACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGTCTTCAGAT 51145 Query 114452 -TTGACATACTTA--GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 || ||| | || | || | || |||| ||||| |||| |||||||| | Sbjct 51144 GTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGA 51085 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 | | ||| || | |||||| ||||| || || ||| || |||||||||||| Sbjct 51084 GCGGAGTATTCAACAATTTCACAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTT 51025 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 || || || || ||||||| ||||||||||||| | | || || || || |||||| Sbjct 51024 TGGTTGGATTTCCTGTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTT 50965 Query 114629 TGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 114688 || | | | |||| | ||| | | ||| | ||| || | || || Sbjct 50964 TGTGCTTCCAATATAGAGTACCACAATTTTTGGGCCTTGATAGTC---TTACCACGGCCT 50908 Query 114689 TCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACG--GCCTCTGAGAGCC 114746 || | ||||| || || ||||||||||| || ||||| | | | || | |||| Sbjct 50907 TCTTTTTCGTAACGGGTATATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTA-AGCC 50849 Query 114747 CTGGTGCCTTATCTGGGC-AGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 ||| ||| || | || |||| | || ||| || || || |||||||||||| Sbjct 50848 -TGGAGCCG-ATGTAGGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATG 50791 Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 || || || || | ||| ||||||| ||| | ||| | || |||||| | || Sbjct 50790 AAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCG 50731 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 ||||| | | || | ||||| | |||||| |||||||| || |||| || | Sbjct 50730 TGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGA 50671 Query 114926 GCGATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982 || | | ||| | | |||| |||||| ||||| | || ||| || || Sbjct 50670 GCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAG 50611 Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTA 115042 || || | ||| ||||| | || | ||| || || || || ||| ||| Sbjct 50610 ACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCG 50551 Query 115043 TTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 115102 | || | | | || || || | ||||||||| || || || || || || Sbjct 50550 GTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCA 50491 Query 115103 CACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAG 115162 || ||| | | | || ||||||| || || || || ||| |||| |||| | ||||| Sbjct 50490 CATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAA 50431 Query 115163 CAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATG 115222 ||| |||||||| ||| ||||||||||||||||||| | ||||| | ||||| | Sbjct 50430 CAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTA 50371 Query 115223 AACATACCTT-GGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 115281 || || || |||||||| | ||||| || | |||| ||||| || ||||| Sbjct 50370 AAG-TATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTG 50312 Query 115282 AATACC 115287 |||||| Sbjct 50311 AATACC 50306 >seq418 Length=2711 Score = 86.0 bits (94), Expect = 7e-12 Identities = 249/376 (66%), Gaps = 8/376 (2%) Strand=Plus/Minus Query 10780 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 10839 ||||| || || ||||| || ||||| ||||| || ||| ||||| || |||||| Sbjct 1708 GATCTGGCGGTCGAAGCGGCCCGGGCGCAGGAGCGCCGGGTCGAGGATGTCGGGGCGGTT 1649 Query 10840 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAG 10899 ||||| ||||||| | || | ||||| | || ||||| |||||||| | ||| Sbjct 1648 GGTCGCGGCGATGAGGATGACGTTCGTCTTGACGTCGAAGCCGTCCATCTCCACGAGGAG 1589 Query 10900 TTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGC 10957 || |||| || || ||||| || || | || | ||| || || | ||| || Sbjct 1588 CTGGTTGAGCGTCTGCTCGCGCTCGTCGTGTCCG--CCGCCCATGCCGGCGCCGCGGTGG 1531 Query 10958 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGA-TTTTCACGGGCAAC 11016 ||||||||||| || || |||| ||| | ||| | ||| || || || ||| Sbjct 1530 CGGCCGACGGCGTCGATCTCGTCGACGAAGATGAT-CGCGGGCGAGTTCTCCTTGGCCTG 1472 Query 11017 TTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGC 11076 | || | || ||||| | | || ||||| || || ||||| || || || | | Sbjct 1471 GTTGAACAGGTCGCGGACGCGGCTCGCGCCGACGCCGACGAACATCTCGACGAAGTCCGA 1412 Query 11077 GGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11135 | ||| | || | | ||| || ||| | || || |||| ||| || ||||| || | Sbjct 1411 GCCGG-AGATCGAGTAGAACGGCACGCCCGCCTCGCCGGCGACGGCGCGCGCGAGCAGCG 1353 Query 11136 TCTTCCCCGTCCCAGG 11151 |||| ||||| || || Sbjct 1352 TCTTGCCCGTGCCGGG 1337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350262286760