Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq224 100 3e-16
seq201 100 3e-16
seq235 98.7 1e-15
>seq224
Length=1007144
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| ||||||||||||||||| | | || | ||||||| || ||
Sbjct 62763 TGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCCAGTTGT 62822
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || || |||| | || ||| ||||| |||||||| ||||| || || || |||||
Sbjct 62823 TTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTG 62882
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| || || | |||||| | || || || | ||| | ||||| || |||
Sbjct 62883 GACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGTC 62942
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
| || || ||||||||||||||
Sbjct 62943 AGTGTCTTGACGAAAATTTGCAT 62965
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || |||||||||||||||||||| | | || | ||||||| || ||
Sbjct 62307 TGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCCAGTTGT 62366
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || || |||| | || ||| ||||| |||||||| ||||| || || || || ||
Sbjct 62367 TTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTA 62426
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| || || | || ||| || || || | |||| |||||| ||||||
Sbjct 62427 GACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTACCGGTC 62486
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
| |||||| || ||||| |||||
Sbjct 62487 AGAGTTTTGACAAAAATCTGCAT 62509
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|||| |||| || || ||||||||||||||||| |||| | || | | || ||
Sbjct 62073 ACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGACAGAGTTCTTCCATCCTCC 62132
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|| || || || || |||| | | ||||||||| || ||||| ||||| || || ||
Sbjct 62133 AGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGG 62192
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414
|| || ||| ||| || | || ||| | || || |||| ||| | |||||
Sbjct 62193 ATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGTCTTA 62252
Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || |||||||| || |||||||||||
Sbjct 62253 CCAGTTAAAGTTTTGACAAAAATTTGCAT 62281
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| || || | |||| || ||||| ||||||||||||||||| | | || | |
Sbjct 62522 TCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACC 62581
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| | ||| || || ||| |||| | | ||| ||||| |||||||| ||||| ||
Sbjct 62582 ATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTT 62641
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || ||| ||| || | || ||| | || || || | ||| |
Sbjct 62642 GTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTGAT 62701
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || || | |||||| || ||||| |||||
Sbjct 62702 AGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 62737
>seq201
Length=186330
Score = 100 bits (110), Expect = 3e-16
Identities = 154/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | |||| ||| | || ||||| ||||| |||||||| || |
Sbjct 47041 ACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 46982
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | ||||||| | ||||| || ||| | || | | || ||||| |||||
Sbjct 46981 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGG 46922
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || ||||| || ||| ||| ||| || | || ||| | || ||
Sbjct 46921 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 46862
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435
||| | ||| | |||||| || ||||||||||| || |||
Sbjct 46861 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 46822
>seq235
Length=640350
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | |||| ||| | || ||||| |||||||||||||| || |
Sbjct 599131 ACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGA 599190
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | ||||||| | ||||| || ||| | || | | || ||||| || ||
Sbjct 599191 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 599250
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| |||||||| ||||| || || || ||| || | || ||| | || ||
Sbjct 599251 GATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 599310
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
||||| ||| | |||||| || |||||||| || |||||
Sbjct 599311 TTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 599349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499642008234680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |