Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq387 407 2e-108
seq373 104 2e-17
seq369 89.7 5e-13
>seq387
Length=3122
Score = 407 bits (450), Expect = 2e-108
Identities = 351/435 (81%), Gaps = 0/435 (0%)
Strand=Plus/Minus
Query 152885 CATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGC 152944
||| |||||||||||||| ||||| |||||||| ||| |||||||||||| || || ||
Sbjct 2372 CATGTTCGAGAGATTCACAGACCGAGCCCGTCGGGTCGTCGTCCTCGCCCAGGAAGAGGC 2313
Query 152945 GCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGA 153004
||| ||||||||||| ||||||||||||||||| | || ||||| || |||||||
Sbjct 2312 GCGGATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTCGGCCTCATCCACGA 2253
Query 153005 GGGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCG 153064
||||||||| || || |||||||||||| || | |||| ||| ||| || | || ||
Sbjct 2252 GGGCGAGGGTGTCGCGGCCAAGGCGCTGGAGTCCCTCGGGATCTCCCTCGACGGCGTCCG 2193
Query 153065 TGCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTT 153124
|| |||| |||||||||||| | ||||||||||| || | |||||||||||||||
Sbjct 2192 CACCCAGGTGACCGAGATCATCGGCGAGGGCCAGCAGGCCCCGAGCGGGCACATCCCGTT 2133
Query 153125 CACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCA 153184
||| ||| ||||| || || ||||||||||||||||||||||| |||||||||||
Sbjct 2132 CACGCCGCGCGCCAAGAAGGTGCTCGAGCTGTCGCTGCGCGAGGCGCTCCAGCTCGGCCA 2073
Query 153185 CAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGTGGG 153244
||||||||||||||||||||| ||||||| | ||| ||||||||||| |||||||| |
Sbjct 2072 CAACTACATCGGCACCGAGCACATCCTGCTCGGCCTCATCCGCGAGGGCGAGGGCGTCGC 2013
Query 153245 CTGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCTGACCAAGGTCCGCCAGGTGGTCATCCA 153304
| |||||| ||| |||| ||||| || || | |||||| |||||| |||||||||
Sbjct 2012 CGCCCAGGTCCTGACGAAGATGGGCGCCGACCTCAACAAGGTGCGCCAGCAGGTCATCCA 1953
Query 153305 GCTGCTGTCCGGGTA 153319
||| |||||||| ||
Sbjct 1952 GCTCCTGTCCGGCTA 1938
>seq373
Length=3671
Score = 104 bits (114), Expect = 2e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 155933 GCGCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGA 155992
|||| |||||||||||||| | |||||||||||| ||||||||| |||| ||
Sbjct 137 GCGCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCG 78
Query 155993 CCAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACC 156052
| |||||||||||||| ||||| | |||||||| || ||| ||||||||||| ||
Sbjct 77 TCGGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACA 18
Query 156053 AGCTGACCGAGGAAGAG 156069
||| |||| | | |||
Sbjct 17 CGCTCACCGCGCAGGAG 1
>seq369
Length=3799
Score = 89.7 bits (98), Expect = 5e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 110993 CGGCCCTGGCCGTGGCTCCGGCGGCGGCTCGCTGGTGAACTACCTGCTGGGCATCACCTC 111052
|||||| ||||||||||| | || ||||| ||| |||||| |||||||||||
Sbjct 1315 CGGCCCGGGCCGTGGCTCGGCCGCGGGCTCCATGGCCTCCTACCTCATGGGCATCACCGA 1374
Query 111053 GCTCGACCCGATCAAGTACGACCTGTCGTTCGAGCGGTTCATCAACCCCGACCG 111106
|||||||||| | || ||| ||| |||||||||||| |||||||||| ||
Sbjct 1375 GCTCGACCCGCTGGAGCACGGGCTGATCTTCGAGCGGTTCCTCAACCCCGAGCG 1428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526595457631440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |