Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq201 105 7e-18
seq235 104 2e-17
seq224 100 3e-16
>seq201
Length=186330
Score = 105 bits (116), Expect = 7e-18
Identities = 158/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| |||||||||| | || |||||||| ||||||||||| |
Sbjct 47040 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 46981
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||||| | |||||||| |||||
Sbjct 46980 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 46921
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | ||||| | || || |
Sbjct 46920 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 46863
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| |||||| ||||||
Sbjct 46862 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 46822
>seq235
Length=640350
Score = 104 bits (114), Expect = 2e-17
Identities = 157/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| |||||||||| | || ||||||||||||||||||||| |
Sbjct 599132 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 599191
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 599192 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 599251
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||||||||| ||| | || | ||| |||| || | |||||| | || || |
Sbjct 599252 ATACCTTCTTTGTC-TTGAATCTTGGATTTGACATTG-TCAATGGTGTCAGAAGATTCAA 599309
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605
| || | || | || |||||||||| ||| || || ||
Sbjct 599310 CTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 599349
>seq224
Length=1007144
Score = 100 bits (110), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461
||| ||||| || | | ||||| ||||||||||||||||| || ||| | ||
Sbjct 62069 CAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGACAGAGTTCTTCCATC 62128
Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521
||| ||||||||||| | | || | | ||| ||||| || || |||||||| |||||
Sbjct 62129 CTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCTTCCTTGTC 62188
Query 138522 GGTGAT-TTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580
||| || | || |||| || | |||||| | || || ||||| | || | |
Sbjct 62189 CTGGATCTTACTCTTCACATTG-TCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAG 62247
Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| |||||||| | |||||| |||||||| |||||
Sbjct 62248 TCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| |||||||||||||| || | || | ||| || ||||||||||| |
Sbjct 62316 GACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCG 62375
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || | | ||||||||||||||| |||||||| ||||| ||| || || |
Sbjct 62376 AAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGACTTGACG 62435
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | || ||||| | || | || ||||| |||||||||||
Sbjct 62436 TTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTG 62495
Query 138601 ACAAAAATCTGCAT 138614
||||||||||||||
Sbjct 62496 ACAAAAATCTGCAT 62509
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||||||||||||||| || || || | || || | |||||||| | |
Sbjct 62544 GATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCTTCCAACTGTTTACCTGCA 62603
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || | | ||||||||| ||||| |||||||| ||||| ||| || || | |
Sbjct 62604 AAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACA 62663
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
|||| | | |||||| | || || ||||| | || | || |||||||| ||||||||
Sbjct 62664 TTGT-CTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTT 62722
Query 138600 TACAAAAATCTGCAT 138614
||||||||||||||
Sbjct 62723 GACAAAAATCTGCAT 62737
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || |||| | ||||||||||| ||||||||||| |
Sbjct 461563 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 461504
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 461503 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 461444
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | || | || |||| || | |||||| | || || |
Sbjct 461443 ATACCTTCCTTGTC-TTGAATCTTAGACTTGACATTG-TCAATGGTGTCTGAAGATTCAA 461386
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || ||||| || | ||| || || ||||| |||||
Sbjct 461385 CTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 461337
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||||||||||||||| || || || | ||| || ||||||||||| |
Sbjct 62772 GATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCG 62831
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || | | ||||||||||||||| || ||||| ||||| |||||| || |
Sbjct 62832 AAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTGGACTTGACG 62891
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | || || | || || ||||| | || | || ||||||||||| || ||
Sbjct 62892 TTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTG 62951
Query 138601 ACAAAAATCTGCAT 138614
|| ||||| |||||
Sbjct 62952 ACGAAAATTTGCAT 62965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496259627133840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |