Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq201 105 7e-18 seq235 104 2e-17 seq224 100 3e-16 >seq201 Length=186330 Score = 105 bits (116), Expect = 7e-18 Identities = 158/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| |||||||||| | || |||||||| ||||||||||| | Sbjct 47040 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 46981 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||| | | |||||| | |||||||| ||||| Sbjct 46980 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 46921 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | |||| || |||| || | ||||| | || || | Sbjct 46920 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 46863 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 | || | || | || |||||||||| |||||| |||||| Sbjct 46862 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 46822 >seq235 Length=640350 Score = 104 bits (114), Expect = 2e-17 Identities = 157/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| |||||||||| | || ||||||||||||||||||||| | Sbjct 599132 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 599191 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||| | | |||| | | |||||||| || || Sbjct 599192 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 599251 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||||||||| ||| | || | ||| |||| || | |||||| | || || | Sbjct 599252 ATACCTTCTTTGTC-TTGAATCTTGGATTTGACATTG-TCAATGGTGTCAGAAGATTCAA 599309 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605 | || | || | || |||||||||| ||| || || || Sbjct 599310 CTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 599349 >seq224 Length=1007144 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| ||||| || | | ||||| ||||||||||||||||| || ||| | || Sbjct 62069 CAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGACAGAGTTCTTCCATC 62128 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| ||||||||||| | | || | | ||| ||||| || || |||||||| ||||| Sbjct 62129 CTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCTTCCTTGTC 62188 Query 138522 GGTGAT-TTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| || | || |||| || | |||||| | || || ||||| | || | | Sbjct 62189 CTGGATCTTACTCTTCACATTG-TCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAG 62247 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||||||| | |||||| |||||||| ||||| Sbjct 62248 TCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| |||||||||||||| || | || | ||| || ||||||||||| | Sbjct 62316 GACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCG 62375 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | | ||||||||||||||| |||||||| ||||| ||| || || | Sbjct 62376 AAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGACTTGACG 62435 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | || ||||| | || | || ||||| ||||||||||| Sbjct 62436 TTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTG 62495 Query 138601 ACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 62496 ACAAAAATCTGCAT 62509 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||||||||| || || || | || || | |||||||| | | Sbjct 62544 GATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCTTCCAACTGTTTACCTGCA 62603 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | | ||||||||| ||||| |||||||| ||||| ||| || || | | Sbjct 62604 AAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACA 62663 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||| | || || ||||| | || | || |||||||| |||||||| Sbjct 62664 TTGT-CTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTT 62722 Query 138600 TACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 62723 GACAAAAATCTGCAT 62737 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || |||| | ||||||||||| ||||||||||| | Sbjct 461563 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 461504 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || | ||| ||||| | | |||| | | |||||||| || || Sbjct 461503 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 461444 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | || | || |||| || | |||||| | || || | Sbjct 461443 ATACCTTCCTTGTC-TTGAATCTTAGACTTGACATTG-TCAATGGTGTCTGAAGATTCAA 461386 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | || ||||| || | ||| || || ||||| ||||| Sbjct 461385 CTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 461337 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||||||||| || || || | ||| || ||||||||||| | Sbjct 62772 GATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCG 62831 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | | ||||||||||||||| || ||||| ||||| |||||| || | Sbjct 62832 AAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTGGACTTGACG 62891 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | || || | || || ||||| | || | || ||||||||||| || || Sbjct 62892 TTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTG 62951 Query 138601 ACAAAAATCTGCAT 138614 || ||||| ||||| Sbjct 62952 ACGAAAATTTGCAT 62965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259627133840