Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq224 114 1e-20
seq235 111 1e-19
seq201 104 2e-17
>seq224
Length=1007144
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || ||||||||||| || || ||||| | ||| || ||| ||||| |||
Sbjct 62535 TGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCTTCCAACTGT 62594
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| ||||| | ||||||| || ||||| || ||||| ||||| || || || || ||
Sbjct 62595 TTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTA 62654
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | |||| |||||| ||||| ||||| || | ||| | || || || |||
Sbjct 62655 CTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTCTTACCAGTT 62714
Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340
|||||||| |||||||| |||||
Sbjct 62715 AGAGTTTTGACAAAAATCTGCAT 62737
Score = 113 bits (124), Expect = 4e-20
Identities = 158/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGG--TTT 45180
|| ||||| |||| || || || || || ||||| || || || || |||| | ||
Sbjct 62064 AGTCTCAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTC--TGACAGAGTTC 62121
Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240
| ||| |||| |||||| || ||| | ||||||| |||||||| || ||||| ||||
Sbjct 62122 TTCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCTT 62181
Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAG 45300
| || || || || || || | |||| |||||| ||||| ||||| || | ||
Sbjct 62182 CCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCTAAAG 62241
Query 45301 TAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| | || || || |||| |||||| ||||||||||||||
Sbjct 62242 TGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || | || || ||||||||||| || || || | ||| |
Sbjct 461551 CTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCG 461492
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 461491 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 461432
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || |||| || | |||||| ||||| || ||||| || ||||
Sbjct 461431 TCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATA 461372
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 461371 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 461336
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || ||||||||||| || || ||||| | ||| || || |||| ||||
Sbjct 62763 TGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCCAGTTGT 62822
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | ||||| | || |||||||| ||||||||||| || || || |||||
Sbjct 62823 TTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTG 62882
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | || || ||||| ||||| || | ||||| || || || ||
Sbjct 62883 GACTTGA-CGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGT 62941
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || |||||||||||
Sbjct 62942 CAGTGTCTTGACGAAAATTTGCAT 62965
>seq235
Length=640350
Score = 111 bits (122), Expect = 1e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || ||||||||||| || || || ||| | |||| ||
Sbjct 599144 CTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCG 599203
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||||||
Sbjct 599204 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 599263
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || ||||| || | |||||| ||||| || ||||| ||||| |
Sbjct 599264 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATG 599323
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 599324 GTCTTACCAGTCAAAGTCTTAACGAA 599349
>seq201
Length=186330
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || |||||||||||||| || || || | |||| ||
Sbjct 47028 CTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 46969
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | || |||| ||| ||||| || || || ||||| ||
Sbjct 46968 TCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTG 46909
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| ||| |||| || | ||||| ||||| || ||||| | ||| |
Sbjct 46908 TCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 46849
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || || | |||||| ||||||
Sbjct 46848 GTCTTACCAGTCAAAGTTTTGACAAAA 46822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452000674432120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |