Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq35 165 1e-35 seq418 86.0 8e-12 >seq35 Length=195003 Score = 165 bits (182), Expect = 1e-35 Identities = 771/1211 (64%), Gaps = 36/1211 (3%) Strand=Plus/Minus Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121 |||||||| || || || || |||||||| || ||||| || || | || || || ||| Sbjct 51504 TCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTAT 51445 Query 116122 GGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 116181 ||||| || | || | || | || || | || || || ||||| || ||| Sbjct 51444 GGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACATGGTTTCA 51385 Query 116182 AAAATGCGAGCATTCATT--GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAA 116239 || || | ||| | | || | || || ||||| || || | | ||| |||| | Sbjct 51384 AAGATTTGTATATTTAGTAAGCGT--GCTTCTTCGGAGTCGAATGGTAAACGCAACAACA 51327 Query 116240 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 116299 | || || || | |||||||||||| | |||| || | |||||||||||||| Sbjct 51326 TGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATATTAGATC 51267 Query 116300 TTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 116359 ||| || ||| || |||||| | || | || ||||| | |||| || |||| Sbjct 51266 TTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTGA 51207 Query 116360 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA- 116412 ||| || | |||||||| ||||||| | | | | | | ||| | ||||| Sbjct 51206 TAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGTCTTCAG 51147 Query 116413 ---TTGACATACTTA--GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 116467 || ||| | || | || | || |||| ||||| |||| |||||||| Sbjct 51146 ATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTG 51087 Query 116468 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 116527 | | | ||| || | |||||| ||||| || || ||| || |||||||||| Sbjct 51086 GAGCGGAGTATTCAACAATTTCACAGCACAAGTTAGACGACTTGATAACACCCAAGTTCT 51027 Query 116528 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCG 116587 |||| || || || ||||||| ||||||||||| | | | | || || || || |||| Sbjct 51026 TTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCG 50967 Query 116588 TTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 116647 |||| | | | |||| | ||| | | ||| | ||| || | || | Sbjct 50966 TTTGTGCTTCCAATATAGAGTACCACAATTTTTGGGCCTTGATAGTC---TTACCACGGC 50910 Query 116648 CCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCA--CAGCCTCTGAGAG 116705 | || | ||||| || || ||||| ||||| || ||||| ||| | || | || Sbjct 50909 CTTCTTTTTCGTAACGGGTATATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTA-AG 50851 Query 116706 CCCTGGTGCCTTATCT-GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764 || ||| ||| || | ||| |||| | || ||| || || || || ||||||| Sbjct 50850 CC-TGGAGCCG-ATGTAGGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCA 50793 Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824 |||| || || || | ||| || || | ||| | ||| | || |||||| | | Sbjct 50792 TGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTAC 50733 Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884 | ||||| | | || | ||||| | |||||| |||||||| || |||| || | Sbjct 50732 CGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATA 50673 Query 116885 CCGCGATTGACCC------CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938 || | | || |||| || ||| ||||| ||||| | || || || Sbjct 50672 GAGCAAAGGCACCAGGTCTCTTGTTACCACC---CTGGTCAACATAACGGGCAGTGTTGT 50616 Query 116939 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG 116998 | || || || | ||| ||||| | || | ||| || || || || ||| || Sbjct 50615 TGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAG 50556 Query 116999 ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 117058 | | | || | | | ||| || || | ||||||||| || || || || || Sbjct 50555 AGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCA 50496 Query 117059 GTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGA 117118 || || ||| | | | || ||||||| || || || || ||| |||| |||| | | Sbjct 50495 AAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTA 50436 Query 117119 GGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGT 117178 |||| ||| |||||||| ||| ||||||||||||||||||| | ||||| | |||| Sbjct 50435 GGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGT 50376 Query 117179 GGATGAACATACCTT-GGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCC 117237 || || || || |||||||| | ||||| || | | | ||||| || Sbjct 50375 -GAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCA 50317 Query 117238 CCGTGAATACC 117248 ||||||||||| Sbjct 50316 CCGTGAATACC 50306 >seq418 Length=2711 Score = 86.0 bits (94), Expect = 8e-12 Identities = 249/376 (66%), Gaps = 8/376 (2%) Strand=Plus/Minus Query 12695 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 12754 ||||| || || ||||| || ||||| ||||| || ||| ||||| || |||||| Sbjct 1708 GATCTGGCGGTCGAAGCGGCCCGGGCGCAGGAGCGCCGGGTCGAGGATGTCGGGGCGGTT 1649 Query 12755 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAG 12814 ||||| ||||||| | || | ||||| | |||||||| |||||||| | ||| Sbjct 1648 GGTCGCGGCGATGAGGATGACGTTCGTCTTGACGTCGAAGCCGTCCATCTCCACGAGGAG 1589 Query 12815 TTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGC 12872 || |||| || || || || || || | || | ||| || || | ||| || Sbjct 1588 CTGGTTGAGCGTCTGCTCGCGCTCGTCGTGTCCG--CCGCCCATGCCGGCGCCGCGGTGG 1531 Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGA-TTTTCACGGGCAAC 12931 ||||||||||| || ||||| | ||| | ||| | ||| || || || ||| Sbjct 1530 CGGCCGACGGCGTCGATCTCGTCGACGAAGATGAT-CGCGGGCGAGTTCTCCTTGGCCTG 1472 Query 12932 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 12991 | || | || || || | | || ||||| || || |||||||| || || | | Sbjct 1471 GTTGAACAGGTCGCGGACGCGGCTCGCGCCGACGCCGACGAACATCTCGACGAAGTCCGA 1412 Query 12992 GGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 13050 | ||| | || | | ||| || ||| | || || |||| ||| || ||||| || | Sbjct 1411 GCCGG-AGATCGAGTAGAACGGCACGCCCGCCTCGCCGGCGACGGCGCGCGCGAGCAGCG 1353 Query 13051 TCTTCCCCGTCCCTGG 13066 |||| ||||| || || Sbjct 1352 TCTTGCCCGTGCCGGG 1337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503772028520