Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq257 279 5e-70 >seq257 Length=84383 Score = 279 bits (308), Expect = 5e-70 Identities = 570/836 (68%), Gaps = 21/836 (3%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || ||| || | || || || || || || || || ||||||||||| Sbjct 41486 TTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAAATGTTT 41427 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTG---CCGATCAGGTCGACG 132720 ||| ||||| ||||||||| | ||||||| ||| || |||| ||| |||| Sbjct 41426 TCCATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTACCGA--AGG-CGACC 41370 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 | || ||||| || |||||||||| |||||| ||| ||| || | || ||| Sbjct 41369 AAAAGTCTGTCTGCGACGAACTCGACGTATTGGTTCATCAAGTCGGCGTTCATACCTAGC 41310 Query 132781 AGACGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | | || || |||| || || || | | ||| ||||| |||| || |||||||| Sbjct 41309 A-AGGCGACTGGCAAGGCGTCTAGGAAGTATCTTTGTTCGATCTCGACGGCCTCGGTGAC 41251 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899 ||||| | ||| || | | |||| | ||| || ||||| ||| || || Sbjct 41250 GATTTTCTCGACGATGGCTGGGTCCGGCTTGTTTTTCAAGTGGGCGAACAACAAACAGGC 41191 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 ||||||| ||||| || ||||| ||| | || ||||||||| ||| ||||| ||||| Sbjct 41190 AAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACCGGG 41131 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 ||| | || | ||| || | ||| || |||| |||||| || ||||||||||| || Sbjct 41130 CATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAAAAGAAGACACC 41071 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG--CTGGCGATC 133077 |||| || ||||| || ||||| | || |||||| ||| || | |||| ||| Sbjct 41070 TTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGGCGTCCTGG--ATC 41013 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC 133137 || | || |||||||||||||| || || || || || ||||||||||| ||| Sbjct 41012 CATCTAAGGGCCCATTCGGCCTTCTCGCAGATTTCTGGGATGGTGTCGATGGCGTTGAAC 40953 Query 133138 AAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACATT 133194 || | | | || |||| || | | |||||||||||| | || || || Sbjct 40952 AA--GAACTCGCT-TTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGGTT 40896 Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254 || ||||| | |||||| || ||||| || || ||||| || | | ||||| | | Sbjct 40895 TCGGAGTGGATGTTCTCGATCGCGATCTGGAACCCGTAGAAACTCTTGGCCTCCGGGATC 40836 Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314 || || || | ||| |||||||| |||||||||||||| |||||| ||||||| Sbjct 40835 TGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCGGCG 40776 Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAG 133371 || ||||| ||||| |||||| | ||||| ||||||| | | |||| Sbjct 40775 AAGAAGGCAAGCACTCTGGAGATGAAGAATCTTTCGTTTTCGTTCATTCTGTTGTTCCAG 40716 Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||| | |||||||||||| ||| | |||||| | ||||| || || |||||||| Sbjct 40715 TCGTGGATGTCCTTGGACAAGTCGATTTCCTCGGCAGTCCAGAAGGAGGCCTCGGC 40660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170005284480