Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq35 233 2e-56 >seq35 Length=195003 Score = 233 bits (258), Expect = 2e-56 Identities = 900/1389 (65%), Gaps = 50/1389 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| || | ||||| | ||||| | ||||| || || || | ||||| | | | Sbjct 50276 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 50335 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730 | || || || || |||||||| | || || | ||||| | ||||| | || Sbjct 50336 CTAGAAACCTATAACTTGATGTCCC-TAAAATACTTTACTCACGCCTCTCCAACTTTATT 50394 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||||||||||||||||| || ||||||||| |||||||| |||||| ||||| || Sbjct 50395 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 50454 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 ||| || | || || |||| |||| | | |||||||| || || || ||||| Sbjct 50455 TTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 50514 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910 |||||| || | || || || | | | || | | ||| ||| ||||| || Sbjct 50515 TGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAA 50574 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 || || | || | ||||| ||| | || || || ||| ||| || || ||||| Sbjct 50575 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGT 50634 Query 111971 AAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGT----CTATCTT--GAGCCATGGCA 112024 |||| | ||| | |||| || || || | |||| || ||||||||||| Sbjct 50635 TGACCAGGGTGG---TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 50691 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| |||||| | || ||| | || | | || || ||| | || || || || Sbjct 50692 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TG 50750 Query 112085 CC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 | | ||| | ||| | ||||| ||| |||| ||||| ||||||||| | || || || | Sbjct 50751 CGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAAGAAA 50810 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAA-GGCACCCGGTCTCTCCGATGCCGTGGGT 112202 |||| |||| || | || | ||| ||| ||| || || | || | ||| Sbjct 50811 ACGGCACTTGGACTTTATTCTCTCCT-ACATCGGCTCCAGGCTTAAGTGACTGCTACGGT 50869 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTG 112262 || || ||||||||||| || || ||||| ||||| | || | | ||| | Sbjct 50870 GACGAATTTGAAGCCCTATATACCCGTTACGAAAAAGAAGGCCGTGGTAA---GACTAT- 50925 Query 112263 CCAGCTGCCGATG---TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | || ||| | ||||| | |||| | | | ||||| || ||||||||||| Sbjct 50926 CAAG--GCCCAAAAATTGTGGTACTCTATATTGGAAGCACAAACGGAAACTGGTACACCC 50983 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | | | ||||||| || || |||||| || || |||||||| |||||||| ||| Sbjct 50984 TTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATC 51043 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 ||| || ||| | || ||||| | |||| | | ||||||||| ||||| Sbjct 51044 AAGTCGTCTAACTTGTGCTGTGAAATTGTTGAATACTCCGCTCCAGATGAGACTGCTGTT 51103 Query 112440 TGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGGATCC-----AGA-GACAAAG- 112490 |||||| | || || | ||| | || || ||| || | | ||| | |||| Sbjct 51104 TGTAACTTGGCTTCTGTTGCTTTGCCAGCATTTAT-TGAAACATCTGAAGACGGCAAAAC 51162 Query 112491 ----ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAA 112546 |||| | | | |||| || || ||| || | ||| | |||| ||| |||| Sbjct 51163 TTCTACATATAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATCACTCGTAACTTAAA 51222 Query 112547 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 112606 || |||||||| | || | ||| || || ||| || | | ||||||||||||||| Sbjct 51223 CAACGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACA 51282 Query 112607 CCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGC---CA 112663 | | || |||| | | |||||||||||| | || || ||||| |||| || | Sbjct 51283 CAGGCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCAT--GTTGTTGCGTTTA 51340 Query 112664 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCA 112723 | |||| || ||||| ||||| | | ||| | || ||||| || ||||| || Sbjct 51341 C-CATTCGACTCCGAAGAAGCACGCTTACTAAATATACAAATCTTTGAAACCATGTACCA 51399 Query 112724 CGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 112783 || | | || || || ||| | || | ||||| ||||| |||||||| | Sbjct 51400 TGCTTCCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAGATGGCCCATACGAAACCTTCCA 51459 Query 112784 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 112843 || ||||||||||| ||||| | |||||||| || |||||||| | | | | Sbjct 51460 AGGCTCTCCAGCTTCTCAAGGTATACTTCAATTCGACATGTGGGACGAAAAACCTTACGG 51519 Query 112844 TCACTACGACTGGGACGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTC 112902 | | || ||||| || | || || | ||||| | || | ||| || | ||| || Sbjct 51520 TATGTGGGATTGGGATACT-TTGAGAAATGACATCATGAAGCATGGTGTTAGAAAC--TC 51576 Query 112903 TTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 112960 ||| |||||||| ||||| || || ||||| | || || || ||| | || || || Sbjct 51577 TTTGACCATGGCACCTATGCCTACTGCATCCACTTCCCAGATTTTAGGTTACAACGAGTG 51636 Query 112961 CTTTGAACC 112969 || ||||| Sbjct 51637 TTTCGAACC 51645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738931601840