Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq35 190 2e-43 seq57 141 1e-28 >seq35 Length=195003 Score = 190 bits (210), Expect = 2e-43 Identities = 879/1371 (64%), Gaps = 44/1371 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || || || || | ||| || || || | ||||| || || ||||| |||||| Sbjct 51645 GGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCC 51586 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || ||||| ||| | || ||| | | | ||||| | || || | | |||||| Sbjct 51585 ATGGTCAAAGA--GTTTCTAACACCATGCTTCATGATGTCATTTCTCAA-AGTATCCCAA 51529 Query 106070 TCGTAGTTGAGCTT--GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACG 106127 || | | | | | ||||| | | ||||||| || |||||||| | ||||| || | Sbjct 51528 TCCCACAT-ACCGTAAGGTTTTTCGT-CCCACATGTCGAATTGAAGTATACCTTGAGAAG 51471 Query 106128 TGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCT 106187 ||||| || | || || || || | || | || ||| | ||||| || | Sbjct 51470 CTGGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTT 51411 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTCATCT 106246 ||| ||| || || ||||||||||||||||| | ||| | | | | ||||| || Sbjct 51410 CCATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGT-GCTTCTTCG 51352 Query 106247 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306 || || |||| | || |||| || || || || | |||||| ||||||||| || Sbjct 51351 GAGTCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCA 51292 Query 106307 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366 || || ||||||| ||||||||| ||| || ||| || |||||| | || | |||| Sbjct 51291 ATCGGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCA 51232 Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 106426 || || ||||| || || | || || | |||||||| || |||| | | | Sbjct 51231 ATAACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTA 51172 Query 106427 AAAGTGCGAGT------CTCTTCA----TTGACATACTT--TGGAAGGGCGATTGATGCC 106474 | || ||| |||||| || ||| | ||| | || | || ||| Sbjct 51171 TATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCC 51112 Query 106475 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTG 106534 || || |||||||| |||||||| | | | ||| || | |||||| |||||||| Sbjct 51111 AAGTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTA 51052 Query 106535 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAG 106594 || ||| || ||||| ||||||||||| || |||| || ||||||||||| Sbjct 51051 GACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAA 50992 Query 106595 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC-ACATCGGC 106653 | | |||| || || || ||||| |||| | | || | | |||| | | | Sbjct 50991 ACAACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCAATATAGAGTACCACAATTTTTGG 50932 Query 106654 GGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 106713 | || | || | || | || || || ||||| || || ||||||||||| Sbjct 50931 GCCTTG----ATAGTCTTACCACGGCCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAA 50876 Query 106714 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC-TTGTCTGGACAGAAAAGAGACCATT 106772 || ||||| ||| | ||||| ||| ||| ||| |||| | || ||| Sbjct 50875 TTCGTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGT-AGGAGAGAATAAAGTCCAAG 50817 Query 106773 GACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 106832 || || || || |||||||||||||| || |||| ||| || | || || | || Sbjct 50816 TGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAAT 50757 Query 106833 CTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 106891 |||| ||| || ||||| | ||| || || || | || | ||| || | |||| Sbjct 50756 CTCTCGCACGGA-TTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATA 50698 Query 106892 TCCGCGTGCCATGGCTC--AAGATAG----ACTGCGATAGATCCCTTTCGACGCCCAGCT 106945 || |||||||||||||| || |||| | || || || ||| | ||| | Sbjct 50697 TCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTA---CCACCC 50641 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 || | ||||| || || ||| ||| || || || | ||| ||||| | || | || Sbjct 50640 TGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAA 50581 Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065 || || || || ||| ||| | || | | | || || || | ||| Sbjct 50580 GTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCA 50521 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 ||||| ||||| || || || ||||| ||| | | ||| | |||||||| | Sbjct 50520 ATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCA 50461 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || || || ||||| | || | ||||| || |||||| || || ||||||||||| Sbjct 50460 ATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCA 50401 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGT 107244 || ||||| | ||||| | |||||| | || || || |||||||| || || || Sbjct 50400 GCGTTGAATAAAGTTGGAGAGGCGTGAGT-AAAGTATTTTAGGGACATCAAGTTATAGGT 50342 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || | | | ||||||| || ||||| || || | ||| || | ||| Sbjct 50341 TTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCAT 50291 >seq57 Length=156688 Score = 141 bits (156), Expect = 1e-28 Identities = 556/863 (64%), Gaps = 16/863 (2%) Strand=Plus/Minus Query 106456 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 106515 ||| || || || || || ||||| |||||||| || ||||| | ||||| | Sbjct 59097 TGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGGAAGAATACTCGAC 59038 Query 106516 AATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTT 106575 ||||| ||||||||| || || || || |||| |||| |||||| ||||| | Sbjct 59037 GATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCT 58978 Query 106576 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGA-A 106634 ||| || |||||||| || | |||| |||| || || || || || |||| |||| | | Sbjct 58977 GTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTTGTG-CTTGCAAGA 58919 Query 106635 TTGCCTTCCACACATCG-GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 106693 | || | ||| || | | | || | |||| || | || || || ||||| Sbjct 58918 TGGCGTACCATACCTTTTGAGCCTTG----ATGGTTTTACCACGACCTTCTCTTTCGTAA 58863 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 || || || |||| || || |||||| ||||| | |||||| || | Sbjct 58862 CGGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGCACTT 58803 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || |||| | | ||| ||| |||| || || |||||||||||||| || |||||| Sbjct 58802 GGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCGGGAATC 58743 Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873 || || | | || | |||||| ||| ||||| | ||| || | || | Sbjct 58742 CATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTCTTTCTGATA 58683 Query 106874 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTC-AAGATAGACTGCGATAGATCC--- 106929 || | || || | ||| || || ||||||||||| |||| | | || | | || Sbjct 58682 TCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAA-AGGGCAAAGGCACCGGG 58624 Query 106930 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 106988 || | | || | |||| | || || || || ||| ||| || || || | ||| | Sbjct 58623 TCTCTTGTTACC-ACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATGG 58565 Query 106989 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 107048 |||| | || | ||| ||| || || || |||| ||| ||| | | || Sbjct 58564 GAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATAT 58505 Query 107049 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108 | ||| || | |||| ||| || || ||| || || |||||||| | | || Sbjct 58504 TGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAG 58445 Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168 | | || ||||| | || ||||| ||||| |||| || ||||| ||| ||||| | Sbjct 58444 TGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTT 58385 Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG- 107227 | || ||| ||||| ||||| || || || || | ||||| |||| || || Sbjct 58384 GAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAG-TATCTCAAC 58326 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287 |||||| || ||| |||| || || || || || || ||||| || || | |||| Sbjct 58325 GACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCC 58266 Query 107288 ACACGCATAAACATGTATTGGGG 107310 |||||||| | || | |||||| Sbjct 58265 ACACGCATGACCAAATGTTGGGG 58243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977503482280