Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq224 185 2e-41
seq235 163 6e-35
seq201 154 3e-32
>seq224
Length=1007144
Score = 185 bits (204), Expect = 2e-41
Identities = 174/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||| | ||||||||| ||||| || ||||| || | | |||
Sbjct 461558 TCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGT 461499
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| || ||||| | || ||||||||| || ||||| ||
Sbjct 461498 TCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACC 461439
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || |||||| || ||||||||||| ||| ||| ||||||||
Sbjct 461438 TTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAG 461379
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| || || ||||| || ||||| | ||||||
Sbjct 461378 GGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 461337
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| |||||||| || | |||||||||||||||||||||||| ||||| || | |||||
Sbjct 62060 TCTTAGTCTCAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGACAGAGT 62119
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || || || ||||| ||||| || | || || |||||||| ||||| ||
Sbjct 62120 TCTTCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACC 62179
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||| || || || ||| || || || |||||||| ||| ||| || || |
Sbjct 62180 TTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCTAA 62239
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || || |||||||| || || | ||||||
Sbjct 62240 AGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || || | || | |||||||||||||||||||||||| |||||||| | || ||
Sbjct 62288 TCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGT 62347
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || || ||||| ||||| || | | |||||||| |||||||| ||
Sbjct 62348 TCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACC 62407
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||| || || || ||||||||| || |||||||| ||| ||| || || |
Sbjct 62408 TTCCTTGTCCTGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAA 62467
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || |||| |||||| || || | |||||
Sbjct 62468 GGTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 62509
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || || | || | |||||||||||| || |||||||| |||||||| | || ||
Sbjct 62744 TCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGT 62803
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| || || ||||| ||||| || | | |||||||| |||||||||||
Sbjct 62804 TCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCC 62863
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||| || ||||| ||||||||| || || || || ||| ||| || || |
Sbjct 62864 TTCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAA 62923
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || |||| || || ||||| | ||||||
Sbjct 62924 AGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 62965
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||| | || | |||||| || || || |||||||| |||||||| | || ||
Sbjct 62516 TCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGT 62575
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | ||| |||||||| || || | || ||||||||||||||||| ||
Sbjct 62576 TCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACC 62635
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||| || || || ||| || || || |||||||| ||| ||| || || |
Sbjct 62636 TTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAA 62695
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || || | |||||| || || | |||||
Sbjct 62696 AGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 62737
>seq235
Length=640350
Score = 163 bits (180), Expect = 6e-35
Identities = 166/214 (78%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | || | |||||| || |||||||| ||||| |||| |||| |
Sbjct 599137 TCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-G 599195
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || ||||||||| || || || |
Sbjct 599196 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 599255
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||||||||||||||| || ||||| || ||||||||||| ||| ||| ||||| |
Sbjct 599256 CTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTA 599315
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
| || | ||||| || |||||||| || |||||
Sbjct 599316 GAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 599349
>seq201
Length=186330
Score = 154 bits (170), Expect = 3e-32
Identities = 164/214 (77%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | || | |||||| || ||||| || ||||| || | |||| |
Sbjct 47035 TCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 46977
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || ||||||||| ||||| || |
Sbjct 46976 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATAC 46917
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| |
Sbjct 46916 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 46857
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || ||||||||||| || ||
Sbjct 46856 AAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 46823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109475245790849
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |