Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq57 147 2e-30 seq35 143 3e-29 >seq57 Length=156688 Score = 147 bits (162), Expect = 2e-30 Identities = 596/935 (64%), Gaps = 9/935 (1%) Strand=Plus/Minus Query 47877 AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATT 47936 || || || || |||| |||||| ||||| |||| ||| || ||| | | ||| Sbjct 59093 AGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGGAAGAATACTCGACGATT 59034 Query 47937 TC--AGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGT 47994 || | |||| || || | ||||||| ||||||| || || || || | ||| Sbjct 59033 TCGCAACACA-AGTTTGACG-ATTTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCTGT 58976 Query 47995 TACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAG 48054 |||| || ||||| |||| ||| || ||||| || |||||| | || | || | ||| | Sbjct 58975 TACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTTGTGCTTGCAAGATGG 58916 Query 48055 ATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAG 48114 | ||| || | |||||| || | | || | | || |||||| | Sbjct 58915 CGTACCATACCTTTTGAGCCTTGATG---GTTTTACCACGACCTTCTCTTTCGTAACGGG 58859 Query 48115 TATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGAC 48174 |||||| || || ||||| || || | || | || || || || || | || Sbjct 58858 TATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGCACTTGGTG 58799 Query 48175 ACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAA 48234 | | || | ||| || |||| | || || | |||| || | ||| || ||||| | Sbjct 58798 AGAATAAGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATA 58739 Query 48235 GAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAA 48294 |||| || ||||| || | | | |||||| || ||| | || || | | || | Sbjct 58738 GAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTCTTTCTGATATCGA 58679 Query 48295 GAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTT 48354 |||||| | || || ||||||||||| || || | | || | |||| |||| | Sbjct 58678 CAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCT 58619 Query 48355 TATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAA 48414 | ||||| ||||| || | || | ||||| ||||| | || | | ||| || | | Sbjct 58618 TGTTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCA 58559 Query 48415 TACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAA 48474 || ||||| |||| ||||| || | ||||||| || | | | ||||| | | Sbjct 58558 ACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGA 58499 Query 48475 TTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCAT 48534 | || ||| | ||||||||| | || || || | |||||| ||| | || || | Sbjct 58498 TATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGT 58439 Query 48535 AAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGAT 48594 |||| ||||| || || || |||| | || |||||| ||||||||| |||| Sbjct 58438 AAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGAT 58379 Query 48595 GACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACA 48654 | || || | |||||||| ||| || || || || | || || || || | || Sbjct 58378 GTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCA 58319 Query 48655 ATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCA 48714 | || || || | | || || || ||||| | || ||||||| | ||||||| Sbjct 58318 AGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCA 58259 Query 48715 TTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTT 48774 | | || || ||| || | ||| | | || | || | | | || || || || Sbjct 58258 TGACCAAATGTTGGGGACGTTCGGCCACTTCACCGTCTAGTCTTAGCAGGTAGGAACGTT 58199 Query 48775 CCAATGTTTTAAAACCAAAATAGTTGTA--TGAAA 48807 ||| || ||||| ||||||||| |||| ||||| Sbjct 58198 CCAGAGTCTTAAACCCAAAATAGGTGTACTTGAAA 58164 >seq35 Length=195003 Score = 143 bits (158), Expect = 3e-29 Identities = 577/896 (64%), Gaps = 37/896 (4%) Strand=Plus/Minus Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270 |||| || | ||| || | ||| |||||| |||||||| || | | | |||||| | Sbjct 50795 TCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCT 50736 Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330 | || |||| || ||| || | ||||| | |||||||| |||||||| || |||| Sbjct 50735 TACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAAT 50676 Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390 ||| || | |||| |||| || ||||| || || || | ||| | |||||| |||| Sbjct 50675 ATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTGT 50616 Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450 | | || | | ||| || | | || || || | || || || || | ||| ||| Sbjct 50615 TGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAG 50556 Query 48451 TTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510 || | || | || || ||| | ||| |||||||| || |||| || || | Sbjct 50555 AGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCA 50496 Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATA 48570 |||||| || | || || || || ||||| || |||||| |||| | || Sbjct 50495 AAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTA 50436 Query 48571 GAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCAT 48630 | ||||| |||||||| || | || || | || ||||| |||||||| || | Sbjct 50435 GGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGT 50376 Query 48631 GAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTAT---ATCCC 48687 || |||| |||| || | ||| ||||| ||||| | | | | || || ||| | Sbjct 50375 GAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCAC 50316 Query 48688 ATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGT 48747 ||| ||||||| | || | ||| | | | ||| || | |||| ||| || Sbjct 50315 CGTGA---ATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGCAACTTGAC 50259 Query 48748 TATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA-TGAA 48806 || | | |||| | || || ||| || ||||||||||| || || |||| |||| Sbjct 50258 CGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAACTGTACTGAA 50199 Query 48807 AAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTT-TAT----ATACT- 48860 || || | |||| | ||| | ||| |||| | | ||||| | || || ||| | Sbjct 50198 AA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTTGTTTTCCATGACAATATTG 50140 Query 48861 ---ACATC--CATTA--CAT---------TTTTTGA-TATAA---TTGA-TTCCTTGTAA 48899 ||||| || | ||| ||| | || | |||| | | ||| Sbjct 50139 TAAACATCGTCAGAAATCATAGGAGCGGCTTTACCAGTAGCAGGGTTGACGTATCTATAA 50080 Query 48900 AGATCTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGAT 48959 ||||| || ||||| | | ||| ||| | |||| |||||| | |||||| || | Sbjct 50079 AGATCCTCAACAACTTTAGAAAACTGTTTCGTGGTTTGTTTATGTAAATTAGAAATGGCG 50020 Query 48960 ATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGT-ACTAGATATTTC 49018 ||||||||||| || |||| |||||||| |||| || || ||||| | | || |||| Sbjct 50019 ATTCTAGCAGCCAAAGTAGCGTAATCTGGGTGAACAGTGGT-CATGTAAGCACATGTTTC 49961 Query 49019 TGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAA 49074 || || || |||||| || | || || |||||| ||| | ||| ||||| Sbjct 49960 AGCGGCCAAATTATCTAGCTCGATCGTTGTGACACCTTCATAGACACCTGAAATAA 49905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562105659217080