Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq224 158 1e-33
seq235 141 7e-29
seq201 136 3e-27
>seq224
Length=1007144
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||||| | || || || |||||||||||||| ||||| || |||||||| |
Sbjct 62511 CCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGAC 62570
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||||| |||| ||||| || ||||||||||| ||||| | |||||| || || |||
Sbjct 62571 AGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGA 62630
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || || || || || || ||| | |||| |||||||| | ||| ||
Sbjct 62631 ATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACC 62690
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| || || || |||| |||||| ||||| ||||||||
Sbjct 62691 TCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 62737
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||||| | || ||||| ||||| || || |||||||| || ||||| || |
Sbjct 62055 CCACCTCTTAGTCTCAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGAC 62114
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| |||| |||| ||| ||||| || || ||||| | ||| || || || |||
Sbjct 62115 AGAGTTCTTCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 62174
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || || || || || || ||| | |||| |||||||| | ||| ||
Sbjct 62175 ATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACC 62234
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| || || || ||||||||||| ||||| || |||||
Sbjct 62235 TCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || | || || || || | || || || ||||| || ||||| || |
Sbjct 461563 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 461504
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||||||| | || |||||||||||||| ||||| ||||| | ||||| || || |||
Sbjct 461503 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 461444
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || |||||||| || || ||| | || | ||||| || | ||| |||
Sbjct 461443 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACT 461384
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || | || || ||||||||||| || || || || |||||
Sbjct 461383 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 461337
Score = 109 bits (120), Expect = 4e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||||| | || || || ||||| || ||||| ||||| || |||||||| |
Sbjct 62739 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGAC 62798
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||||| | || |||| ||| ||||| || || ||||| | |||||| || || |||
Sbjct 62799 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 62858
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || || ||||| || || | || | ||| ||||| | ||| ||
Sbjct 62859 ATGCCTTCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACC 62918
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472
|| | ||| | || || || || | || || || || || ||||| ||
Sbjct 62919 TCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCATAGT 62968
>seq235
Length=640350
Score = 141 bits (156), Expect = 7e-29
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || | || |||||||| | || ||||| ||||| || ||||| ||||
Sbjct 599132 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 599191
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||||| | || |||||||||||||| ||||| ||||| | ||||| || || ||
Sbjct 599192 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 599251
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| |||||||| |||||||| || ||| ||| | || | |||||||| | ||| |||
Sbjct 599252 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACT 599311
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460
|| ||||||| || || || || ||||| || || ||
Sbjct 599312 TCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 599349
>seq201
Length=186330
Score = 136 bits (150), Expect = 3e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| || | || |||||||| | || ||||| ||||| || ||||| || |
Sbjct 47040 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 46981
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||||| | || |||||||||||||| ||||| || || | ||||| || || ||
Sbjct 46980 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 46921
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || |||||||| ||| || ||| | || | ||||||||| | ||| |||
Sbjct 46920 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 46861
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460
|| | ||||| || || || || |||||||| |||||
Sbjct 46860 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 46823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396276241149579
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |