Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq35 140 2e-28
seq57 120 2e-22
>seq35
Length=195003
Score = 140 bits (154), Expect = 2e-28
Identities = 316/473 (67%), Gaps = 4/473 (1%)
Strand=Plus/Minus
Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951
||| |||||||| |||| | |||| || || || ||| || | ||| |||| |
Sbjct 50835 GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACC 50776
Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011
|| | || |||||||||||||| | |||||||| || |||||||||||| | |
Sbjct 50775 CATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATG 50716
Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071
|| | ||| || || ||||| | ||||||||| || ||||| | |||||| ||| |
Sbjct 50715 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 50656
Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131
|| || ||||| || || || || | ||||| | ||||| || | ||| |||
Sbjct 50655 CTCTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGA 50596
Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191
| ||| || | ||| ||||| || | | ||| | || || || | | ||| | |
Sbjct 50595 ATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTG 50536
Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAACTG 26249
||| ||| | ||| || |||||||| ||| ||||| ||||| || | ||| |
Sbjct 50535 TGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAA--G 50478
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
| ||| | || |||| ||| |||| | |||||| | | || ||||| || || | ||
Sbjct 50477 TGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTT 50418
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | ||| || | || ||||| || || | || |||||| | |||
Sbjct 50417 GAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTAT 50365
>seq57
Length=156688
Score = 120 bits (132), Expect = 2e-22
Identities = 287/434 (66%), Gaps = 0/434 (0%)
Strand=Plus/Minus
Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989
|| ||| || | ||| |||||||| | ||| || |||||||| || | ||||||||
Sbjct 58764 CTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTC 58705
Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049
|| || ||| ||||| | | ||| | || || || || |||| |||||||| || ||
Sbjct 58704 CTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAA 58645
Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109
| | ||||| ||| ||| || |||||||| || ||||| | |||||| |
Sbjct 58644 GAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTT 58585
Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169
||||| || | ||| |||| || || ||||| ||||| || | ||| |
Sbjct 58584 GTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATA 58525
Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229
|| ||||| || | ||||| || ||||| ||| | ||||| || || |||||
Sbjct 58524 AGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAAT 58465
Query 26230 AGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAA 26289
||||| ||| | || ||| |||| |||| ||| || | ||||| | |
Sbjct 58464 CATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAAT 58405
Query 26290 TAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGC 26349
| ||||||||||| | ||| | ||| | || || | |||||||| ||| || | |||
Sbjct 58404 CAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGC 58345
Query 26350 ATGAGTATAATATC 26363
|| || | ||||
Sbjct 58344 GTGGGTGAAGTATC 58331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253038621485525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |