Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq35 140 2e-28 seq57 120 2e-22 >seq35 Length=195003 Score = 140 bits (154), Expect = 2e-28 Identities = 316/473 (67%), Gaps = 4/473 (1%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||| |||||||| |||| | |||| || || || ||| || | ||| |||| | Sbjct 50835 GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACC 50776 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | || |||||||||||||| | |||||||| || |||||||||||| | | Sbjct 50775 CATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATG 50716 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || | ||| || || ||||| | ||||||||| || ||||| | |||||| ||| | Sbjct 50715 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 50656 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 || || ||||| || || || || | ||||| | ||||| || | ||| ||| Sbjct 50655 CTCTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGA 50596 Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191 | ||| || | ||| ||||| || | | ||| | || || || | | ||| | | Sbjct 50595 ATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTG 50536 Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAACTG 26249 ||| ||| | ||| || |||||||| ||| ||||| ||||| || | ||| | Sbjct 50535 TGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAA--G 50478 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309 | ||| | || |||| ||| |||| | |||||| | | || ||||| || || | || Sbjct 50477 TGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTT 50418 Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362 | | | | ||| || | || ||||| || || | || |||||| | ||| Sbjct 50417 GAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTAT 50365 >seq57 Length=156688 Score = 120 bits (132), Expect = 2e-22 Identities = 287/434 (66%), Gaps = 0/434 (0%) Strand=Plus/Minus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||| || | ||| |||||||| | ||| || |||||||| || | |||||||| Sbjct 58764 CTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTC 58705 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 || || ||| ||||| | | ||| | || || || || |||| |||||||| || || Sbjct 58704 CTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAA 58645 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 | | ||||| ||| ||| || |||||||| || ||||| | |||||| | Sbjct 58644 GAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTT 58585 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169 ||||| || | ||| |||| || || ||||| ||||| || | ||| | Sbjct 58584 GTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATA 58525 Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229 || ||||| || | ||||| || ||||| ||| | ||||| || || ||||| Sbjct 58524 AGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAAT 58465 Query 26230 AGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAA 26289 ||||| ||| | || ||| |||| |||| ||| || | ||||| | | Sbjct 58464 CATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAAT 58405 Query 26290 TAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGC 26349 | ||||||||||| | ||| | ||| | || || | |||||||| ||| || | ||| Sbjct 58404 CAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGC 58345 Query 26350 ATGAGTATAATATC 26363 || || | |||| Sbjct 58344 GTGGGTGAAGTATC 58331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038621485525