Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq35 242 4e-59 >seq35 Length=195003 Score = 242 bits (268), Expect = 4e-59 Identities = 912/1405 (65%), Gaps = 44/1405 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| || | ||||| | ||||| | || || ||||| || ||||||| | | Sbjct 50276 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 50335 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || || || |||||||| || || || | |||||| | ||||| | || Sbjct 50336 CTAGAAACCTATAACTTGATGTCCCTAAAATACTTT-ACTCACGCCTCTCCAACTTTATT 50394 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| ||||||||||||| || || |||||| || ||||| | || | ||||| || Sbjct 50395 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 50454 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | |||||||| | ||| | | ||| ||||| || || || ||||| Sbjct 50455 TTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 50514 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | || || || | | | || | ||| ||| || || || Sbjct 50515 TGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAA 50574 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | || | ||||| ||| | || || || ||| ||| || || ||||| Sbjct 50575 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGT 50634 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 | || ||| || |||| | || || | || | || ||||| |||||||| Sbjct 50635 TGACCA---GGGTGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 50691 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | || ||| | || | || || || ||| | ||||| || ||| Sbjct 50692 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAA-TCCGTG 50750 Query 75685 T-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 |||||| | || || | || ||| |||| || |||||||||||||| || || || Sbjct 50751 CGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAAGAAA 50810 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAA-GGCACCAGGTCTCTCCGACGCGGTGGGT 75802 || ||| || | |||| ||| ||| ||| ||||| | ||| ||| Sbjct 50811 ACGGCACTTGGACTTTATTCTCTCCT-ACATCGGCTCCAGGCTTAAGTGACTGCTACGGT 50869 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || || ||||||||||| || || || ||| | || || | | || |||| | Sbjct 50870 GACGAATTTGAAGCCCTATATACCCGTTACGAAAAAGAAGGCCGTGGTAA---GACTAT- 50925 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | || | | | || ||| | |||| | || |||| ||||| ||||| ||||| | Sbjct 50926 CAAGGCCCAAAAATTGTGGTACTCTATATTGGAAGCACAAACGGAAACTGGTACACCCTT 50985 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 | | ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| Sbjct 50986 TGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATCAA 51045 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || || | ||| |||||| | || ||| | | | |||||||| |||||||| Sbjct 51046 GTCGTCTAACTTGTGCTGTGAAATTGTTGAATACTCCGCTCCAGATGAGACTGCTGTTTG 51105 Query 76042 CAATTTGGCATCAATCGCCCTTCCA--AAGTATGTCAA----TGAAGAG------ACTCG 76089 || ||||| || | || | ||| | ||| || |||||| ||| Sbjct 51106 TAACTTGGCTTCTGTTGCTTTGCCAGCATTTATTGAAACATCTGAAGACGGCAAAACTTC 51165 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 || | | | | |||| || |||||||| | || || | || || ||||| Sbjct 51166 TACATATAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATCACTCGTAACTTAAACAA 51225 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 || |||||| | || | |||||| || ||| || ||| ||||||||| ||||||| Sbjct 51226 CGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACACAG 51285 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATT 76269 || |||| ||||||||| |||||| | || || || || |||| || | |||| Sbjct 51286 GCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCATGTTGTTGCGTTTACCATT 51345 Query 76270 TGATTCAGATGAAGCCAAGGAGA-TGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 || || || ||||| | | | | ||| | ||||||||||||||||| || || | Sbjct 51346 CGACTCCGAAGAAGC-ACGCTTACTAAATATACAAATCTTTGAAACCATGTACCATGCTT 51404 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 || |||| || |||||| | ||| || | || | || || || || | || | Sbjct 51405 CCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAGATGGCCCATACGAAACCTTCCAAGGCT 51464 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACC--AAGCTCAA 76446 |||| || || ||||| | ||||| || || ||||||| | | ||||| | | | | Sbjct 51465 CTCCAGCTTCTCAAGGTATACTTCAATTCGACATGTGGG-ACGAAAAACCTTACGGT-AT 51522 Query 76447 CTACGACTGGGATGTTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | || |||||| | | || || | ||||| | || | ||| || | ||| ||||| Sbjct 51523 GTGGGATTGGGATACT-TTGAGAAATGACATCATGAAGCATGGTGTTAGAAAC--TCTTT 51579 Query 76506 --TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563 |||||||| ||||| || || ||||| | || || || ||| | || || || || Sbjct 51580 GACCATGGCACCTATGCCTACTGCATCCACTTCCCAGATTTTAGGTTACAACGAGTGTTT 51639 Query 76564 TGAACCATACACAACAAACATCTAC 76588 |||||| || | ||||| ||| Sbjct 51640 CGAACCAGTTACTTCCAACATGTAC 51664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566266667360