Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_021305.1 Length=76179 Score E Sequences producing significant alignments: (Bits) Value seq336 168 3e-37 seq397 122 4e-23 >seq336 Length=6918 Score = 168 bits (186), Expect = 3e-37 Identities = 223/309 (72%), Gaps = 13/309 (4%) Strand=Plus/Minus Query 60184 TCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCA 60243 |||| | ||| || | ||||| |||||||| ||||||| || ||| || |||| Sbjct 1359 TCGGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCA 1300 Query 60244 ACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAAGGCAAC---TGGGT 60295 ||||||| || | ||||| |||||| | |||| ||| ||| ||| Sbjct 1299 ACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAA 1245 Query 60296 CGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAGC 60355 ||||| ||| || ||| | |||||| | ||||||||||| ||||| |||||||| || Sbjct 1244 GGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGC 1185 Query 60356 GGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTT 60415 ||| || ||| ||| ||||||||||||||| ||| |||| |||||||| | Sbjct 1184 GGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTA 1125 Query 60416 CGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCC 60475 ||||||| ||||| || |||||||||||| ||||| || |||| ||||||||||| || Sbjct 1124 CGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCC 1065 Query 60476 GTCGCTGCG 60484 || ||||| Sbjct 1064 CTCCCTGCG 1056 >seq397 Length=3056 Score = 122 bits (134), Expect = 4e-23 Identities = 148/198 (75%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 50396 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 50454 || ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| | Sbjct 2414 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 2356 Query 50455 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 50511 ||||| | ||| |||||| ||| || | | |||| |||||||||||| || Sbjct 2355 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 2299 Query 50512 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 50571 || | ||||||| || |||| |||||||||| ||| ||| ||||||||| || Sbjct 2298 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 2239 Query 50572 CACCGTCGCCGCGGAGCT 50589 |||||||| ||||||||| Sbjct 2238 CACCGTCGTCGCGGAGCT 2221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243646672651380