Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_021311.1 Length=76479 Score E Sequences producing significant alignments: (Bits) Value seq336 168 3e-37 seq397 125 3e-24 >seq336 Length=6918 Score = 168 bits (186), Expect = 3e-37 Identities = 213/292 (73%), Gaps = 13/292 (4%) Strand=Plus/Minus Query 60945 GACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCAACTTCACCGTCGTGTCC 61004 ||||| |||||||| ||||||| || ||| || ||||||||||| || | |||| Sbjct 1342 GACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCC 1283 Query 61005 AACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGTCGACGGCGACGCCACAT 61056 | |||||| | |||| |||| ||| ||| ||||| ||| || | Sbjct 1282 A-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGT 1228 Query 61057 TCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCGGAAAGCCTCCAGAAAG 61116 || | |||||| | ||||||||||| ||||| |||||||| ||||| || ||| | Sbjct 1227 TCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGG 1168 Query 61117 GCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTTCGAGACCAAGGAGGGCG 61176 || ||||||||||||||| ||| |||| |||||||| | ||||||| ||||| | Sbjct 1167 GCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGG 1108 Query 61177 ACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCCGTCGCTGCG 61228 | |||||||||||| ||||| || |||| ||||||||||| || || ||||| Sbjct 1107 AGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCCCTCCCTGCG 1056 >seq397 Length=3056 Score = 125 bits (138), Expect = 3e-24 Identities = 149/198 (75%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 51001 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTGCTCTCCAAGAA 51059 || ||||||||| | ||||||||| | ||| || ||||||| ||||||||| || ||| | Sbjct 2414 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 2356 Query 51060 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 51116 ||||| | ||| |||||| ||| || | | |||| |||||||||||| || Sbjct 2355 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 2299 Query 51117 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 51176 || | ||||||| || |||| |||||||||| ||| ||| ||||||||| || Sbjct 2298 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 2239 Query 51177 CACCGTCGCCGCGGAGCT 51194 |||||||| ||||||||| Sbjct 2238 CACCGTCGTCGCGGAGCT 2221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244606667421480