Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq35 224 3e-53
seq57 122 3e-22
seq426 113 1e-19
seq190 93.3 1e-13
seq301 89.7 2e-12
>seq35
Length=195003
Score = 224 bits (248), Expect = 3e-53
Identities = 616/935 (66%), Gaps = 14/935 (1%)
Strand=Plus/Minus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCA 155645
||| ||| |||| ||||| || |||||||| | || | || |||||| ||||| |||
Sbjct 51122 CAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAG-CGGAGTATTCAACAATTTCA 51064
Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705
||||||| |||||| |||||| || || ||||| ||||| ||||| |||||||||
Sbjct 51063 CAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAA 51004
Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG- 155764
||||||||||| | || | || || || || ||| | ||||| |||| || | ||
Sbjct 51003 GCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCA--ATATAGAGT 50946
Query 155765 -CCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATAT 155823
||| | | |||| || || ||| | |||||| || || |||
Sbjct 50945 ACCACAATTTTTGGGCCTTGATAGTCTTACCA---CGGCCTTCTTTTTCGTAACGGGTAT 50889
Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG-GCACTTATCGGGGCAA 155882
| || | | | || |||||||| || ||||| | || || || | | || | |
Sbjct 50888 ATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGTAGGAG-AG 50830
Query 155883 AACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATA 155942
|| | | |||| | || | ||||||| ||| || | ||| |||| | |
Sbjct 50829 AATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGA 50770
Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002
|| ||| | || || || || || | ||||||||||| | | || | |
Sbjct 50769 GCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATG 50710
Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG 156062
|| || ||||||| || |||||||| ||| | |||||| |||| ||||||
Sbjct 50709 AAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTG 50650
Query 156063 ---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|||||||| || ||||| || ||||| || |||||||||| | ||||||||| |
Sbjct 50649 TTACCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAAC 50590
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
|| || ||||| || || || || ||| | || || | || |||| || ||||||
Sbjct 50589 CCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATA 50530
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
||||| ||||||||||| | ||| ||||| ||| |||||||| | ||| | | |
Sbjct 50529 TGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAG 50470
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
||||||||||| |||||||| | ||||| | ||| | || || | |||||| |
Sbjct 50469 ATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTT 50410
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359
||||| ||||||||||||| || || | || ||| |||| || || ||||| |
Sbjct 50409 GGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAG 50350
Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419
| || || || | ||||| ||| |||||||||| | | ||| |||||
Sbjct 50349 TTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATG 50290
Query 156420 CACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCC 156479
| || || ||||| || ||| || | | || || | ||| | |||||
Sbjct 50289 ATTAAGTGTTGTGGACGTTCAGCAACTTGACCGTTGACTCTCAATAAGTACGAACGTTCT 50230
Query 156480 AGAGTTTTAAACCCGAAATAATCAAACAGAAAATC 156514
| ||||||||| ||||| ||| || |||||||
Sbjct 50229 AAAGTTTTAAAACCGAAGTAACTGTACTGAAAATC 50195
>seq57
Length=156688
Score = 122 bits (134), Expect = 3e-22
Identities = 291/440 (66%), Gaps = 0/440 (0%)
Strand=Plus/Minus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| ||||| || || || || || ||||| || |||||||||| | ||| ||||| |
Sbjct 58616 TTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAAC 58557
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
|| || ||||| || ||||| || ||||| || || | || |||| ||| | |||
Sbjct 58556 CCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATA 58497
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
|| || |||| |||||||| || ||||| || || || || | ||| | | ||
Sbjct 58496 TGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAA 58437
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
||||||||||| || || || | ||| | | || | || ||| | |||||| ||
Sbjct 58436 ATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGT 58377
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359
|| || || || || |||||||| || | || || | || || | ||||| |
Sbjct 58376 GGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAG 58317
Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419
| ||| |||| | | ||| | || |||||||||| | | || | |||
Sbjct 58316 TTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATG 58257
Query 156420 CACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCC 156479
|| ||| || ||||| || | | | || || | || || ||||| | ||||||
Sbjct 58256 ACCAAATGTTGGGGACGTTCGGCCACTTCACCGTCTAGTCTTAGCAGGTAGGAACGTTCC 58197
Query 156480 AGAGTTTTAAACCCGAAATA 156499
||||| |||||||| |||||
Sbjct 58196 AGAGTCTTAAACCCAAAATA 58177
>seq426
Length=100507
Score = 113 bits (124), Expect = 1e-19
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| ||| | || ||| || ||| || ||||| | | |||| |||||||||
Sbjct 82101 TTTCTTGTGGTGTTGTCGTAATGAACCATGATATCTTCTAGAGCTTTGACTAAACGACGT 82160
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| || ||| || ||||| ||||| || ||||| |||||||||||
Sbjct 82161 TGAATATAACCTGTTTCAGCTGTCTTAACAGCAGTATCGATAAGACCTTCACGACCACCC 82220
Query 302659 ATAGCATGGAAGAATAGCTCTT 302680
|| ||||||||||| | |||||
Sbjct 82221 ATTGCATGGAAGAAAAACTCTT 82242
Score = 89.7 bits (98), Expect = 2e-12
Identities = 103/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||| | | ||| |||||||| || || || |||||| || ||||| || ||
Sbjct 81362 AATTTCCTTTAAACGAGGAACACCGGAAGTGACTTT---CTTGGAAGCCACACCGGCGAA 81418
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934
|||||||||||||| || | ||| |||| ||||||||| || ||| || |||| |
Sbjct 81419 ATGGAAAGTATTCAGTGTCATTTGTGTAGCTGGCTCACCGATGGATTGAGCTGCAAGAAC 81478
Query 301935 ACCAACCATTTCTCCTGG 301952
|||||||||||| || ||
Sbjct 81479 ACCAACCATTTCACCAGG 81496
>seq190
Length=622597
Score = 93.3 bits (102), Expect = 1e-13
Identities = 301/461 (65%), Gaps = 10/461 (2%)
Strand=Plus/Plus
Query 233259 TTAAAAATGTTGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCA 233318
|||| |||| | |||||||| || |||||||||||||||||||||||||||| | |
Sbjct 167018 TTAAGAATGAAGCGGCACCGTGTGCGATCATACAATCACGTTCCATTTCACCAAATCTTA 167077
Query 233319 GACCACCATCATTTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCT 233378
|||||| || |||| ||||| | || | ||| | |||||||| |||||||
Sbjct 167078 AACCACCGTCTCTTGATCTACCTTCCACCGGTTGTCTTGTTAAAACTTGCATTGGACCAC 167137
Query 233379 GAGCACGATAATTAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGAC 233438
| || | || ||| || || | |||||||| | | | ||||| ||||
Sbjct 167138 GGGCTCTGGCATGAATCTTGTCATCCACCATATGTCTTAAACGTTGGTAATATGTAGGAC 167197
Query 233439 CAATAAATAGTTCTGCGTGTAATTGTTCCCCAGATTCACCGCTGTATAAAACTTCATTAC 233498
||| || | || || ||||| || || | | ||| |||| | ||||||| |
Sbjct 167198 CAAAGAAGATTTGAGCCATTAATTTTTTACCTGTGTGACCATTGTACATAACTTCAAACC 167257
Query 233499 C-CGATGAATTGTAACCAATATCTTTTAATAGAGAACCAAATACCTGATGCTTTGGACCT 233557
| ||| || | ||||||| || ||||| | | ||||| | || |
Sbjct 167258 CACGA-GATTGGTAACCATGTTCACGTAATA-ATTTAGATATACCCTCTACTGT-----A 167310
Query 233558 TTATTAGCAAACGCAGTACAATCACCAAAACCACCATACGTCGCACACGCTTTACCCATT 233617
| | | ||| | || | |||||| |||| | ||| | | |||| || |
Sbjct 167311 ATGTCTGTAAATGGAGAAGCATCACCTTCGTTACCAGATAATGCAGCCACCTTACTCAAT 167370
Query 233618 AAAGTTTCTATCAACTGACCGATAGTCATTCTACTTGGTAGAGCGTGTGGATTGATAATT 233677
||| ||| || || || | | |||||| | | ||| | ||| || ||||||||||||
Sbjct 167371 AAACATTCGATTAAATGCGCCACAGTCATACGAGATGGAATAGCATGAGGATTGATAATT 167430
Query 233678 AAATCTGG-ACGTACTCCCTCCGATGTAAAAGGCATATCTT 233717
|||||||| ||| | || || | |||||| ||||||||||
Sbjct 167431 AAATCTGGTACG-ATACCTTCTGCTGTAAATGGCATATCTT 167470
Score = 91.5 bits (100), Expect = 4e-13
Identities = 370/571 (65%), Gaps = 14/571 (2%)
Strand=Plus/Plus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
||| | ||| || ||| ||||||| ||||| || || | |||| ||| ||
Sbjct 166971 ACAAATATGAACTCTGAAAGCATCGGATGCTTCCATTAATCTTTCCTTTAAGAATGAAGC 167030
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|||||||||| |||||||||||||| ||||||||||| || | | |||||| || |
Sbjct 167031 GGCACCGTGTGCGATCATACAATCACGTTCCATTTCACCAAATCTTAAACCACCGTCTCT 167090
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
| ||||| || | || || | || | | ||| ||||| || | | |||
Sbjct 167091 TGATCTACCTTCCACCGGTTGTCTTGTTAAAACTTGCATTGGACCACGGGCTCTGGCATG 167150
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCT 251663
||| |||| |||||||| | | ||| ||||| ||| ||||| | |||||| |
Sbjct 167151 AATCTTGTCATCCACCATATGTCTTAAACGTTGGTAATATGTAGGACCAAAGAAGAT--T 167208
Query 251664 CGAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720
|| | |||| | | || || || | || ||||||||||| ||| |||||
Sbjct 167209 TGA-GCCATTAATTTTTTACCTGTGTGACCATTGTACATAACTTCAAACCCACGAGATTG 167267
Query 251721 ATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGT 251780
|||||| ||| ||| | || ||| | | | || ||| | || || |||
Sbjct 167268 GTAACCATGTTCACGTAATAATTTAGATATACCCTCTA-CTGTAATGT-CTGTAAATGGA 167325
Query 251781 GCCG--TCTCCGTAAAGACCCATTTGAATCAAC-ACTTTGCCTAAAAGTGTCTCTTTCAG 251837
| | || || | ||| | | | || | || || | || | || | |
Sbjct 167326 GAAGCATCACCTTCGTTACC-AGATAATGCAGCCACCTTACTCAATAAACATTCGATTAA 167384
Query 251838 TTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAG 251897
|| || | |||||||||| ||||||||||| |||||||| || | || ||| |
Sbjct 167385 ATGCGCCACAGTCATACGAGATGGAATAGCATGAGGATTGATAATTAAATCTGGTACGAT 167444
Query 251898 TCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTT 251956
|| || || || || ||||||| ||| || | ||| || | |||||||| |||||||
Sbjct 167445 ACCTTCTGCTGTAAATGGCATAT-CTTCTCTACGATATGTGATACCAATAGTACCCTTTT 167503
Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987
| || ||||||||| ||| || ||||| ||
Sbjct 167504 GACCATGACGAGAAGCGAATTTGTCACCGAT 167534
Score = 91.5 bits (100), Expect = 4e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||| | |||||| | |||||| | |||||||||||| | | |||||||||||| |
Sbjct 273599 GCACCATAAGCAATGACACAATCTCTTTCCATTTCACCTAATCTCAGACCACCATCTCTA 273658
Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392
|||||||| | | |||||| || || || | ||| ||||| |||| | |
Sbjct 273659 GACCTACCTTCAGTAGGTTGACGCGTCAAGACCGCTCTAGGACCACGAGCTCTTGCGTGC 273718
Query 233393 ATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAATAAATAGTTCT 233452
|| |||||| ||||||||||||| | | ||||||| || |||| ||| | | |
Sbjct 273719 ATCTTATCTAAGACCATATGCTTCAATTTTTGATAATAAATTGGCCCAAAAAAGATATAT 273778
Query 233453 GCGTGTAA 233460
|| |||||
Sbjct 273779 GCTTGTAA 273786
>seq301
Length=626894
Score = 89.7 bits (98), Expect = 2e-12
Identities = 247/378 (65%), Gaps = 3/378 (1%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||||||||| ||||| | | ||| ||| || | || |||| || || || |
Sbjct 433230 CCTATCAAATCTACCGGGTCTTAATAAGGCTTTATCAAGGATGTCGGGCCTATTAGTACC 433289
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
||||| ||||||| | || | | | |||| |||||||| || ||||||||
Sbjct 433290 AGCCAAGACAACAACATGATCAGCTGGAGTAAAACCATCCATTTCCACCAACATTTGATT 433349
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
| ||| | ||| ||||||||||| | |||| ||| ||| | || |||
Sbjct 433350 CAATGTGTTTTCTCTTTCATCATTAGCACCTGAAAAATTACC---TTTTTGTCTAGCTTT 433406
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|| | |||||||||||||||||| || | | | |||| |||| || ||| ||
Sbjct 433407 CCCGATAGCATCAATTTCGTCAATAAACACAATCGAAGGAGCGTTTTCCCTTGCAGTTTT 433466
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|| || |||||||| | | || || | ||| ||| ||||||| ||||| || ||| |
Sbjct 433467 GAACAAATCTCTTACCCTTGCAGCACCGACACCTACAAACATTTCAACAAACTCTGAACC 433526
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
||| || | ||||| || || || || || ||| |||| || | || ||
Sbjct 433527 GGAAACAAAATAGAATGGGACGCCGGCCTCACCGGCGGTAGCCTTCGCAAGCAAGGTTTT 433586
Query 289209 ACCTGTTCCAGGTGGTCC 289226
||| || || ||||| ||
Sbjct 433587 ACCGGTACCTGGTGGACC 433604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471809170624639
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |