Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq224 107 2e-18 seq394 95.1 1e-14 seq201 82.4 6e-11 >seq224 Length=1007144 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||||||| |||| || || || || || | || || || Sbjct 62737 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCT 62678 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || || ||||| ||||| ||||| | || || ||| Sbjct 62677 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAA 62618 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||| | |||| ||| ||||||||| |||| |||| ||||| || ||||||||||| Sbjct 62617 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAAC 62558 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| |||||||| | ||| |||| ||||||| |||| || Sbjct 62557 ATTCAAAAGGAATCTACCCTTCACTTGGTCCTAAGACTAAGAGGTGG 62511 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || |||||||| || ||||| ||||||||||| || || |||||| | ||| || || Sbjct 461334 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 461393 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || || | | | | || || |||||| ||||| ||||| | || || Sbjct 461394 TCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 461453 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||||||| | || | ||| ||||| || |||| || | |||||| || | || ||| Sbjct 461454 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 461513 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| || || || || ||| |||| || ||| || |||| || Sbjct 461514 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 461563 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| || | || || || || ||||| | || || || Sbjct 62965 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 62906 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| ||| | | || || || || ||||| |||||| | || ||| ||| Sbjct 62905 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 62846 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| || |||||||| ||||| || | ||||| || ||||||||||| Sbjct 62845 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAAC 62786 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| ||||| || | ||| |||| |||| || |||| || Sbjct 62785 ATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 62739 >seq394 Length=691677 Score = 95.1 bits (104), Expect = 1e-14 Identities = 206/299 (69%), Gaps = 12/299 (4%) Strand=Plus/Minus Query 34314 GAGCTCAGTCTCCGGGTTGTCACA--TTCCGGACACAACACAAACTTGCGGATGAAACCA 34371 || ||| || || || || | ||| |||| ||| | |||||| || |||||| || Sbjct 512656 GATCTCGGTTTCTGGATTCTTACAACTTCC--ACAAAGAACAAACCTGTTGATGAACCCG 512599 Query 34372 TCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTT 34431 || | || ||| || |||||| | | || || |||||||| | | || || || Sbjct 512598 TCCAACACGTCTTGCAACTTAGCAGGTTCATGAACACCGTTGACCAAATAACGATCTTTG 512539 Query 34432 TTGTAATCGACCTGC--GTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG-GTAA 34488 | | || || | ||||| || ||||| ||| | ||||||||||| | || ||| Sbjct 512538 TCG--ATGGAAATAGAGGTTTGAGCACCCAGTTCGAAACCGAAGTACTT-GACGATGTAT 512482 Query 34489 ATGGCCGGAC-GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGAT 34547 ||| || | || ||| ||| | |||||| || | || ||| | ||| | || ||||| Sbjct 512481 GGGGCAGGTCTGTTCAA-CGCATGGGCGATGTCAGCCACGTTCAGGATTGCTGTTTTGAT 512423 Query 34548 GCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACG 34606 ||||| || | ||||||||||| || ||| | ||||||||||| |||||||||| Sbjct 512422 ACCGTTACCTCTACCTTCGACCTTAGCCTGGATTGGAGGCATTTTGTAACGGTAGAACG 512364 >seq201 Length=186330 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTC 110341 |||||||||||||| || || || ||||| || | ||| || || || ||| | Sbjct 46823 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46882 Query 110342 GGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTT 110401 | | | || || |||||| ||||| ||||| | || || ||||||||| | Sbjct 46883 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46942 Query 110402 ATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAA 110461 || | ||| ||||| || |||| || | ||||| || | || |||||||| ||||| Sbjct 46943 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 47002 Query 110462 GAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || | || || ||| || |||| || Sbjct 47003 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 47040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839350916371