Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_022976.1 Length=75894 Score E Sequences producing significant alignments: (Bits) Value seq336 165 4e-36 seq397 122 4e-23 >seq336 Length=6918 Score = 165 bits (182), Expect = 4e-36 Identities = 212/292 (73%), Gaps = 13/292 (4%) Strand=Plus/Minus Query 60355 GACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCAACTTCACCGTCGTGTCC 60414 ||||| |||||||| ||||||| || ||| || ||||||||||| || | |||| Sbjct 1342 GACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCC 1283 Query 60415 AACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGTCGACGGCGACGCCACAT 60466 | |||||| | |||| |||| ||| ||| ||||| ||| || | Sbjct 1282 A-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGT 1228 Query 60467 TCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCGGAAAGCCTCCAGAAAG 60526 || | |||||| | ||||||||||| ||||| |||||||| ||||| || ||| | Sbjct 1227 TCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGG 1168 Query 60527 GCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTTCGAGACCAAGGAAGGCG 60586 || ||||||||||||||| ||| |||| |||||||| | ||||||| || || | Sbjct 1167 GCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGG 1108 Query 60587 ACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCCGTCGCTGCG 60638 | |||||||||||| ||||| || |||| ||||||||||| || || ||||| Sbjct 1107 AGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCCCTCCCTGCG 1056 >seq397 Length=3056 Score = 122 bits (134), Expect = 4e-23 Identities = 148/198 (75%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 50520 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 50578 || ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| | Sbjct 2414 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 2356 Query 50579 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 50635 ||||| | ||| |||||| ||| || | | |||| |||||||||||| || Sbjct 2355 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 2299 Query 50636 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 50695 || | ||||||| || |||| |||||||||| ||| ||| ||||||||| || Sbjct 2298 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 2239 Query 50696 CACCGTCGCCGCGGAGCT 50713 |||||||| ||||||||| Sbjct 2238 CACCGTCGTCGCGGAGCT 2221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242734677619785