Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_022981.1 Length=76323 Score E Sequences producing significant alignments: (Bits) Value seq336 178 6e-40 seq397 118 5e-22 >seq336 Length=6918 Score = 178 bits (196), Expect = 6e-40 Identities = 225/309 (73%), Gaps = 13/309 (4%) Strand=Plus/Minus Query 60594 TCGGCACCCTTACCGCCGACCCCGAGCTGCGGTTCACTTCCGGTGGGCAGGCCGTCGCCA 60653 |||| | ||| || | ||||| |||||||| ||||| || || ||| || |||| Sbjct 1359 TCGGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCA 1300 Query 60654 ACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGT 60705 ||||||| || | ||||| |||||| | |||| |||| ||| ||| Sbjct 1299 ACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAA 1245 Query 60706 CGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAGC 60765 ||||| ||| || ||| | |||||| | ||||||||||| ||||| |||||||| || Sbjct 1244 GGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGC 1185 Query 60766 GGAAAGCCTCCAGAAGGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTT 60825 ||| || ||||||| ||||||||||||||| ||| |||| |||||||| | Sbjct 1184 GGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTA 1125 Query 60826 CGAGACCAGGGAAGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCC 60885 ||||||| | || || || |||||||||||| ||||| || |||| ||||||||||| || Sbjct 1124 CGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCC 1065 Query 60886 GTCGCTGCG 60894 || ||||| Sbjct 1064 CTCCCTGCG 1056 >seq397 Length=3056 Score = 118 bits (130), Expect = 5e-22 Identities = 145/197 (74%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 50959 CCACCCCAGGACCTAGCCGCCGAGTCGGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAAC 51018 || ||||||||| | ||||||||| | || ||||||| |||||| || || ||| || Sbjct 2414 CCGCCCCAGGACGTCGCCGCCGAGATGAGCGTGCTCGGCGGCATGCTGCTGTCGAAGGAC 2355 Query 51019 GCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCAC 51075 |||| | ||| |||||| ||| || | | |||| |||||||||||| ||| Sbjct 2354 GCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCAC 2298 Query 51076 GCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCATC 51135 | | ||||||| || |||| |||||||||| ||| ||| ||||||||| ||| Sbjct 2297 GAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGATC 2238 Query 51136 ACCGTCGCCGCGGAGCT 51152 ||||||| ||||||||| Sbjct 2237 ACCGTCGTCGCGGAGCT 2221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244107470141028