Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_022988.1
Length=74210
Score E
Sequences producing significant alignments: (Bits) Value
seq336 172 3e-38
seq397 122 4e-23
>seq336
Length=6918
Score = 172 bits (190), Expect = 3e-38
Identities = 224/309 (72%), Gaps = 13/309 (4%)
Strand=Plus/Minus
Query 58927 TCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCA 58986
|||| | ||| || | ||||| |||||||| ||||||| || ||| || ||||
Sbjct 1359 TCGGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCA 1300
Query 58987 ACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGT 59038
||||||| || | ||||| |||||| | |||| |||| ||| |||
Sbjct 1299 ACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAA 1245
Query 59039 CGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGC 59098
||||| ||| || ||| | |||||| | ||||||||||| ||||| |||||||| ||
Sbjct 1244 GGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGC 1185
Query 59099 GGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTT 59158
||| || ||| ||| ||||||||||||||| ||| |||| |||||||| |
Sbjct 1184 GGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTA 1125
Query 59159 CGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCC 59218
||||||| ||||| || |||||||||||| ||||| || |||| ||||||||||| ||
Sbjct 1124 CGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCC 1065
Query 59219 GTCGCTGCG 59227
|| |||||
Sbjct 1064 CTCCCTGCG 1056
>seq397
Length=3056
Score = 122 bits (134), Expect = 4e-23
Identities = 148/198 (75%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 49032 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 49090
|| ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| |
Sbjct 2414 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 2356
Query 49091 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 49147
||||| | ||| |||||| ||| || | | |||| |||||||||||| ||
Sbjct 2355 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 2299
Query 49148 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 49207
|| | ||||||| || |||| |||||||||| ||| ||| ||||||||| ||
Sbjct 2298 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 2239
Query 49208 CACCGTCGCCGCGGAGCT 49225
|||||||| |||||||||
Sbjct 2238 CACCGTCGTCGCGGAGCT 2221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 237345906976957
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |