Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq201 120 7e-22
seq224 113 1e-19
seq235 98.7 2e-15
>seq201
Length=186330
Score = 120 bits (132), Expect = 7e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| |||||| | || || || || |||||||||||||| ||| ||||||||| |
Sbjct 46822 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 46881
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| |||||||||||| || ||||| || || ||| |||||| |
Sbjct 46882 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATT 46941
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| || || ||||| |||||||| || || || ||| | || |||||| |||| ||
Sbjct 46942 AATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAA 47001
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || ||| | || | || ||||||
Sbjct 47002 GGAATCCACTTTACATTTAGTCTTGAGA 47029
>seq224
Length=1007144
Score = 113 bits (124), Expect = 1e-19
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| || || || || || ||||||||||| || ||| |||||||
Sbjct 62734 CAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCTGAC 62675
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || ||||| ||| || ||| ||
Sbjct 62674 ACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAACAG 62615
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | || || || || || |||||||||||||| || || || | ||||||||| |
Sbjct 62614 AGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAACATT 62555
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
|| || || ||||| |||||| | || | |||||
Sbjct 62554 CAAAAGGAATCTACCCTTCACTTGGTCCTAAGACT 62520
Score = 104 bits (114), Expect = 6e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || | ||||| ||| ||| ||||| | || || |||
Sbjct 461361 ACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCAGACACCATTGACAATGTCAAGTCT 461420
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| |||||| | ||||| || || |||
Sbjct 461421 AAGATTCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 461480
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || |||||| | || |||||| |||| || ||||| ||| | |||
Sbjct 461481 CAATTGGAAGACGGCAGAACTTTGTCTGACTACAACATCCAAAAGGAGTCCACTTTACAC 461540
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 461541 TTGGTCTTGAGA 461552
>seq235
Length=640350
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||| | ||||| ||| ||||||||| | || || ||
Sbjct 599334 ACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACAATGTCAAATCC 599275
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| |||||||| || || ||| |||||| | ||||| || || |||
Sbjct 599274 AAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 599215
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || || ||| |||| |||||| | || || || || ||| | ||
Sbjct 599214 CAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACAT 599155
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 599154 TTAGTCTTGAGA 599143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181814031490687
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |