Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq224 102 7e-17
seq257 89.7 5e-13
seq235 89.7 5e-13
seq201 89.7 5e-13
>seq224
Length=1007144
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| ||||| ||||| || || | ||||| | || |||||| |
Sbjct 62281 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAGACTATCACTTTAGAGGTCGAATCTTCT 62222
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || || || || || || || ||||| || || || |||
Sbjct 62221 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAG 62162
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAT--GTCAGCGATTACA 25352
|| ||| | |||| || || |||||||| || |||| |||| | ||||| | ||||
Sbjct 62161 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGAAGAACTCTGTCAG--ACTACA 62104
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| ||||||||||| ||||| |||| ||||| || ||| | ||||| ||
Sbjct 62103 ACATTCAAAAAGAGTCCACTCTTCACTTAGTCTTGAGACTAAGAGGTGG 62055
Score = 89.7 bits (98), Expect = 5e-13
Identities = 165/240 (69%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 25164 AATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAG 25223
||||| ||| |||||| | || || || ||| | || || || | || || | || |
Sbjct 62976 AATTAGACACTATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGG 62917
Query 25224 TCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATAC 25283
||||| | ||||||||||| | || || ||||| || || || || || |
Sbjct 62916 TCGAATCTTCTGATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTC 62857
Query 25284 CGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGT 25341
| || || || || || | |||| || || |||||||| ||||| | ||||| |||
Sbjct 62856 CTCCGGACCAACAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGT 62797
Query 25342 CAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||| |||||||| |||||||| |||| || || |||| | ||||| ||
Sbjct 62796 C--GGATTACAACATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 62739
>seq257
Length=84383
Score = 89.7 bits (98), Expect = 5e-13
Identities = 133/185 (72%), Gaps = 4/185 (2%)
Strand=Plus/Minus
Query 110710 GTGCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACG-T 110768
|| ||||| | || | ||| ||||| |||||| ||| ||||| ||||| || || |
Sbjct 40818 GTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCGGCGAAGAAGGCAAGCACTCT 40759
Query 110769 GTTTAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGG 110828
| | ||| ||||| ||| || ||||||| | | ||||||||||| | | ||||||||
Sbjct 40758 GGAGATGAA-GAATCTTTCGTTTTCGTTCATTCTGTTGTTCCAGTCGTGGATGTCCTTGG 40700
Query 110829 ACATGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888
||| |||||| || ||| | ||||| | | | || |||||||||||||| |
Sbjct 40699 ACAAGTCGATTTCCTCGGCAGTCCAGAAGGAGGCCTCGGCACGCTTGTACGATTGCC--A 40642
Query 110889 GATCT 110893
|||||
Sbjct 40641 GATCT 40637
>seq235
Length=640350
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
|| || || || || || || || | ||||| | ||||| ||| | || || ||
Sbjct 599349 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 599290
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || ||| || ||| || ||||| ||||| || || || || |||||| |
Sbjct 599289 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 599230
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| ||| ||||| |||||||
Sbjct 599229 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTC--CGACTACAACATTCAAA 599172
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||| | |||||||| || ||||||||||| ||
Sbjct 599171 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 599132
>seq201
Length=186330
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
||||| ||||| || || || || | ||||| | ||||| ||| | || |||||
Sbjct 46823 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46882
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || || ||| ||| || || || ||||| || || || || |||||| |
Sbjct 46883 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46942
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| | | ||||| || ||||
Sbjct 46943 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTG--ACTACAACATCCAAA 47000
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||| | |||||||| || ||||||||||| ||
Sbjct 47001 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 47040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445091913035040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |