Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq35 230 3e-55 >seq35 Length=195003 Score = 230 bits (254), Expect = 3e-55 Identities = 908/1405 (65%), Gaps = 44/1405 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | || |||||| || || || || | ||| || || || | ||||| Sbjct 51664 GTACATGTTGGAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGA 51605 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823 || || ||||| |||||||| ||||| ||| | || ||| | || | ||||| | Sbjct 51604 TGCAGTAGGCATAGGTGCCATGGTCAAAGA--GTTTCTAACACCATGCTTCATGATGTCA 51547 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATGTCAAAC 110881 || || | | |||||| || | | | | | ||||| | | |||||||||| || Sbjct 51546 TTTCTCAA-AGTATCCCAATCCCACAT-ACCGTAAGGTTTTTCGT-CCCACATGTCGAAT 51490 Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941 ||||| | ||||| || || ||||| || | |||||||| || | || | || | Sbjct 51489 TGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGA 51430 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | ||||| || |||| ||| || || ||||||||||||||||| | ||| Sbjct 51429 GCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTT 51370 Query 111002 A-TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 111060 | | | | ||||| || || || |||| | || |||| || || || || | Sbjct 51369 AGTAAGCGT-GCTTCTTCGGAGTCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAA 51311 Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 111120 |||||| ||||||||| |||| || ||||||| ||||||||| ||| || ||| || Sbjct 51310 ACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGAC 51251 Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 |||||| | || | |||||| || ||||| || || | || || | ||||| Sbjct 51250 AGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTC 51191 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGT------CTCTTCA----TTGACATACTT-- 111228 ||| || |||| | | | | || ||| |||||| || ||| | Sbjct 51190 ATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGC 51131 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| | || | || ||||| || |||||||| |||||||| | | | ||| || | Sbjct 51130 TGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAAC 51071 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 |||||| || ||||| || ||| || ||||| ||||||||||| ||| | Sbjct 51070 AATTTCACAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCT 51011 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || ||||||||||| | | |||| || || || ||||| |||| || | || Sbjct 51010 GTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCAATAT 50951 Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467 || | ||| || | | | || | || | || | || || || ||||| Sbjct 50950 AGAGTACCACAATTTTTGGGCCTTG----ATAGTCTTACCACGGCCTTCTTTTTCGTAAC 50895 Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC-TTGTCT 111526 || || ||||||||||| || ||||| ||| | ||||| ||| ||| Sbjct 50894 GGGTATATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGT-A 50836 Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586 ||| |||| | || ||| || ||| || || |||||||||||||| || |||| | Sbjct 50835 GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACC 50776 Query 111587 CACAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 || || | || || | |||||| ||| || ||||| | ||| || || || | Sbjct 50775 CATAGAGCTGGGAATAAATCTCTCGCACGGA-TTTCTTCCTTACCGTGATTCTTTCTAAT 50717 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTC--AAGATAG----ACTGCGATAGA 111699 || | ||| || | |||||| |||||||||||||| || |||| | || || Sbjct 50716 GTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGG 50657 Query 111700 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 || ||| | ||| | || | ||||| || || ||| ||| || || || | ||| Sbjct 50656 TCTCTTGTTA---CCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCAT 50600 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 ||||| | || | || || || || || ||| ||| | || | | Sbjct 50599 AGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAAT 50540 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 | || || || | |||||||| ||||| || || || ||||| ||| | | Sbjct 50539 GTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAA 50480 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 ||| | |||||||| | || || || ||||| | || | ||||| || |||||| Sbjct 50479 AGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACAT 50420 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT- 111998 || || ||||||||||||| ||||| | ||||| | |||||| | || || || Sbjct 50419 TTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGT-AAAGTATTTTA 50361 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 |||||||| || || || || | | | ||||||| || ||||| || || | | Sbjct 50360 GGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGG 50301 Query 112059 CGACCCGCATGAACATGTACTGTGG 112083 |||| | ||||| | || ||||| Sbjct 50300 CGACTCTCATGATTAAGTGTTGTGG 50276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028490871200