Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq35 194 2e-44 >seq35 Length=195003 Score = 194 bits (214), Expect = 2e-44 Identities = 889/1387 (64%), Gaps = 46/1387 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| || | ||||| | || ||| | |||||||| || || ||||||| | | Sbjct 50276 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 50335 Query 104282 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | || || || || |||||||| || || || | |||||| | ||||| | || Sbjct 50336 CTAGAAACCTATAACTTGATGTCCCTAAAATACTTT-ACTCACGCCTCTCCAACTTTATT 50394 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| ||||||||||||| || ||||||||| || ||||| | || | ||||| || Sbjct 50395 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 50454 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 || || | |||||||| | ||| | | ||| ||||| || || || ||||| Sbjct 50455 TTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 50514 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| | || || || | | | || | ||| ||| || || || Sbjct 50515 TGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAA 50574 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || || | || | ||||| ||| | || || || ||| ||| || || ||||| Sbjct 50575 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGT 50634 Query 104581 AAATCAAGCTGGGCGTCGAAAGGGATCTATCGCAGT----CTATCTT--GAGCCATGGCA 104634 | || | ||| | ||| || || || | |||| || ||||||||||| Sbjct 50635 TGACCAGGGTGG---TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 50691 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||| |||||| | || ||| | || | | || || ||| | || || || || Sbjct 50692 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TG 50750 Query 104695 CC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | | ||| | ||| | ||||| ||| |||| ||||| ||||||||| | || || || | Sbjct 50751 CGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAAGAAA 50810 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAA-GGCACCTGGTCTCTCCGATGCCGTGGGT 104812 |||| |||| || | || | ||| ||| ||| || || | || | ||| Sbjct 50811 ACGGCACTTGGACTTTATTCTCTCCT-ACATCGGCTCCAGGCTTAAGTGACTGCTACGGT 50869 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || || ||||||||||| || || ||||| ||||||| || | | ||| | Sbjct 50870 GACGAATTTGAAGCCCTATATACCCGTTACGAAAAAGAAGGCCGTGGTAA---GACTAT- 50925 Query 104873 CCAGCTGCCGATG---TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | || ||| | ||||| | |||| | | | ||||| || ||||||||||| Sbjct 50926 CAAG--GCCCAAAAATTGTGGTACTCTATATTGGAAGCACAAACGGAAACTGGTACACCC 50983 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | | ||||||| || || |||||| || || |||||||| |||||||| ||| Sbjct 50984 TTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATC 51043 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 ||| || || | || ||||| | |||| | | ||||||||| ||||| Sbjct 51044 AAGTCGTCTAACTTGTGCTGTGAAATTGTTGAATACTCCGCTCCAGATGAGACTGCTGTT 51103 Query 105050 TGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGGATCC-----AGA-GACAAAG- 105100 |||||| | || || | ||| | || || ||| || | | ||| | |||| Sbjct 51104 TGTAACTTGGCTTCTGTTGCTTTGCCAGCATTTAT-TGAAACATCTGAAGACGGCAAAAC 51162 Query 105101 ----ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 |||| | | | |||| || || ||| || | ||| | |||| ||| |||| Sbjct 51163 TTCTACATATAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATCACTCGTAACTTAAA 51222 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 || |||||||| | || | ||| || || ||| || | | ||||||||||||||| Sbjct 51223 CAACGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACA 51282 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCC---A 105273 | | || |||| | | ||||| || ||| | || || ||||| |||| || | Sbjct 51283 CAGGCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCATG--TTGTTGCGTTTA 51340 Query 105274 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCA 105333 | |||| || ||||| ||||| | | ||| | || ||||| |||||||| || Sbjct 51341 C-CATTCGACTCCGAAGAAGCACGCTTACTAAATATACAAATCTTTGAAACCATGTACCA 51399 Query 105334 CGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393 || | | || || || ||| | || | ||||| ||||| |||||||| | Sbjct 51400 TGCTTCCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAGATGGCCCATACGAAACCTTCCA 51459 Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 105453 || ||||||||||| ||||| | |||||||| || |||||||| | | | | Sbjct 51460 AGGCTCTCCAGCTTCTCAAGGTATACTTCAATTCGACATGTGGGACGAAAAACCTTACGG 51519 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTC 105512 | | || ||||| || | || || | ||||| | || | ||| || | ||| | Sbjct 51520 TATGTGGGATTGGGATACT-TTGAGAAATGACATCATGAAGCATGGTGTTAGAAACTCTT 51578 Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572 | |||||| || ||||| || || ||||| | || || || ||| | || || || | Sbjct 51579 TGACCATGGCACCTATGCCTACTGCATCCACTTCCCAGATTTTAGGTTACAACGAGTGTT 51638 Query 105573 TTGAACC 105579 | ||||| Sbjct 51639 TCGAACC 51645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257541030280