Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq35 89.7 6e-13 >seq35 Length=195003 Score = 89.7 bits (98), Expect = 6e-13 Identities = 281/432 (65%), Gaps = 10/432 (2%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACA 19171 ||||| ||||||| | || || || || || || | ||| |||| || || Sbjct 50289 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATT----GAGGCCGCTCTAGAAACC 50344 Query 19172 TACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGT 19231 || || ||||| || || | ||| || ||||| | || || | |||||||| ||| Sbjct 50345 TATAACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGT 50404 Query 19232 ACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAG 19291 || || || || ||||| |||||||||||| || ||||||||||| |||||| Sbjct 50405 ACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAA 50464 Query 19292 GGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351 || |||||||| || | ||||| || || || ||||| | || ||||| || Sbjct 50465 GGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGT 50524 Query 19352 ATCCACTGCTC-GAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC 19410 | || | || || || || | | || | || ||| |||||||| | Sbjct 50525 CTACA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTC 50583 Query 19411 CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGG 19470 |||| | | || ||| |||| |||||||||||||| ||| | || || ||||||| Sbjct 50584 TAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGG 50643 Query 19471 GGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCAT 19530 || ||| | || | || || | || | |||||||||||||| || || | Sbjct 50644 TGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTT 50703 Query 19531 GGATTTCCTCGA 19542 || ||| |||| Sbjct 50704 CGACTTCATCGA 50715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521735117680