Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq35 170 2e-37 seq57 123 3e-23 seq257 114 1e-20 >seq35 Length=195003 Score = 170 bits (188), Expect = 2e-37 Identities = 348/509 (68%), Gaps = 6/509 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||| | |||||||| ||||| |||||||| || | | || || || || || Sbjct 50289 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCTCTA-GAAACCTAT 50347 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 |||| ||| || ||| |||||||| |||||| | ||||| | |||||||||||||| Sbjct 50348 AACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGTACA 50407 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||||| ||||| ||| ||||| || || ||||||||||| || || || || Sbjct 50408 CCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAAGGT 50467 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| || | ||||| ||||| || ||||| | |||||||| ||| | Sbjct 50468 ATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTA 50527 Query 53432 CACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | || ||| | ||||| | |||| | || || |||||||| | | Sbjct 50528 CA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTCTAA 50586 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || | | |||||| |||| |||||||||||||| ||||| || || |||||||||| Sbjct 50587 CGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGGTGG 50646 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | ||| | || | || || | || | ||||| |||||||| || || | || Sbjct 50647 TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGA 50706 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTA 53669 || |||| | | |||||| ||| | ||||| || || ||| | || | || Sbjct 50707 CTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCC 50765 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATG 53698 ||||||| ||| |||| || || |||||| Sbjct 50766 CAGCTCTATGGGTTCCCGATCTTTTCATG 50794 >seq57 Length=156688 Score = 123 bits (136), Expect = 3e-23 Identities = 337/511 (66%), Gaps = 10/511 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG----AGACG 53248 ||||||| || ||| | ||||| ||||| ||| || || ||||||| |||| Sbjct 58256 TCATGCGTGTGGCCCTAGGTATTCACGGCAGCGA-TAT---CGAGTCCGTGCTGAAGACT 58311 Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308 ||| |||| ||| | ||||| || ||||| | || || || || || || ||| Sbjct 58312 TACAACTTGATGTCGTTGAGATACTTCACCCACGCTTCCCCCACACTATTTAATGCCGGT 58371 Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368 ||| || ||||| ||||| || |||||| | || |||||||| ||||| || || Sbjct 58372 ACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAA 58431 Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428 || || ||||| || | || ||||||||| || |||||| | |||||| | ||| Sbjct 58432 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 58491 Query 53429 ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488 | || | || | ||| | | ||| | || || || ||||| | Sbjct 58492 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 58551 Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548 | || | | || ||| |||| |||||||||||||| || || ||||| |||| ||| Sbjct 58552 AACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGT 58611 Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608 ||| ||| | || | || ||| | | | | ||||| ||||| || ||||| | Sbjct 58612 GGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTC 58671 Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT 53667 || ||| |||| | | || ||| ||| | ||||| || || ||| | || |||| Sbjct 58672 GACTTTGTCGATATCAGAAAGACTCATGGTAAGGAAGAAATTCG-TGCAAGAGATTTGTT 58730 Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 | ||||| |||||||| || || |||||| Sbjct 58731 CCCTGCTCTATGGATTCCCGATCTTTTCATG 58761 >seq257 Length=84383 Score = 114 bits (126), Expect = 1e-20 Identities = 294/437 (67%), Gaps = 13/437 (3%) Strand=Plus/Minus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || ||| | ||||| ||||||| |||| ||| || || || | | || Sbjct 41193 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACC 41134 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| | || | ||||||||||| ||||||| |||||| || ||||||| Sbjct 41133 GGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAAAAGAAGAC 41074 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925 ||||||| | || || ||||| || | || ||||| | ||||||| ||| | Sbjct 41073 ACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGG-CGTCCTGGA 41015 Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984 |||| | | |||||||| | ||| ||| || | |||| || ||||| || | | Sbjct 41014 TCCATCTAAGGGCCCATTCGGCCTTCTCG-CAGATTTCTGGGATGGTGTCGATGGCGTTG 40956 Query 74985 AAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042 || | | || || ||| ||| ||| ||||||| | |||| |||| | ||||| | Sbjct 40955 AACAAGAACTCGCTTTC-CTT-GGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGG 40898 Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 | || || || || |||| | ||| |||| || |||||||| | ||||| | Sbjct 40897 TTTCGGAGTGGATGTTCTCGAT-CGCGATCTGGAACCCGTAGAAACTCTTGGCCTCCGGG 40839 Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161 ||||| || || | || || ||| | | | || || ||||||| ||||| |||||| Sbjct 40838 ATCTGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCG 40779 Query 75162 GCGAAAAAAGCCAGTAC 75178 ||||| || || || || Sbjct 40778 GCGAAGAAGGCAAGCAC 40762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212942430600