Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq35 170 2e-37
seq57 123 3e-23
seq257 114 1e-20
>seq35
Length=195003
Score = 170 bits (188), Expect = 2e-37
Identities = 348/509 (68%), Gaps = 6/509 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251
||||| | |||||||| ||||| |||||||| || | | || || || || ||
Sbjct 50289 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCTCTA-GAAACCTAT 50347
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
|||| ||| || ||| |||||||| |||||| | ||||| | ||||||||||||||
Sbjct 50348 AACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGTACA 50407
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
| ||||| ||||| ||| ||||| || || ||||||||||| || || || ||
Sbjct 50408 CCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAAGGT 50467
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|||||||| || | ||||| ||||| || ||||| | |||||||| ||| |
Sbjct 50468 ATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTA 50527
Query 53432 CACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| | || ||| | ||||| | |||| | || || |||||||| | |
Sbjct 50528 CA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTCTAA 50586
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| | | |||||| |||| |||||||||||||| ||||| || || ||||||||||
Sbjct 50587 CGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGGTGG 50646
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
| ||| | || | || || | || | ||||| |||||||| || || | ||
Sbjct 50647 TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGA 50706
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTA 53669
|| |||| | | |||||| ||| | ||||| || || ||| | || | ||
Sbjct 50707 CTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCC 50765
Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATG 53698
||||||| ||| |||| || || ||||||
Sbjct 50766 CAGCTCTATGGGTTCCCGATCTTTTCATG 50794
>seq57
Length=156688
Score = 123 bits (136), Expect = 3e-23
Identities = 337/511 (66%), Gaps = 10/511 (2%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG----AGACG 53248
||||||| || ||| | ||||| ||||| ||| || || ||||||| ||||
Sbjct 58256 TCATGCGTGTGGCCCTAGGTATTCACGGCAGCGA-TAT---CGAGTCCGTGCTGAAGACT 58311
Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308
||| |||| ||| | ||||| || ||||| | || || || || || || |||
Sbjct 58312 TACAACTTGATGTCGTTGAGATACTTCACCCACGCTTCCCCCACACTATTTAATGCCGGT 58371
Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368
||| || ||||| ||||| || |||||| | || |||||||| ||||| || ||
Sbjct 58372 ACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAA 58431
Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428
|| || ||||| || | || ||||||||| || |||||| | |||||| | |||
Sbjct 58432 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 58491
Query 53429 ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488
| || | || | ||| | | ||| | || || || ||||| |
Sbjct 58492 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 58551
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
| || | | || ||| |||| |||||||||||||| || || ||||| |||| |||
Sbjct 58552 AACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGT 58611
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
||| ||| | || | || ||| | | | | ||||| ||||| || ||||| |
Sbjct 58612 GGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTC 58671
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT 53667
|| ||| |||| | | || ||| ||| | ||||| || || ||| | || ||||
Sbjct 58672 GACTTTGTCGATATCAGAAAGACTCATGGTAAGGAAGAAATTCG-TGCAAGAGATTTGTT 58730
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
| ||||| |||||||| || || ||||||
Sbjct 58731 CCCTGCTCTATGGATTCCCGATCTTTTCATG 58761
>seq257
Length=84383
Score = 114 bits (126), Expect = 1e-20
Identities = 294/437 (67%), Gaps = 13/437 (3%)
Strand=Plus/Minus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || ||| | ||||| ||||||| |||| ||| || || || | | ||
Sbjct 41193 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACC 41134
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869
||||| | || | ||||||||||| ||||||| |||||| || |||||||
Sbjct 41133 GGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAAAAGAAGAC 41074
Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925
||||||| | || || ||||| || | || ||||| | ||||||| ||| |
Sbjct 41073 ACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGG-CGTCCTGGA 41015
Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984
|||| | | |||||||| | ||| ||| || | |||| || ||||| || | |
Sbjct 41014 TCCATCTAAGGGCCCATTCGGCCTTCTCG-CAGATTTCTGGGATGGTGTCGATGGCGTTG 40956
Query 74985 AAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042
|| | | || || ||| ||| ||| ||||||| | |||| |||| | ||||| |
Sbjct 40955 AACAAGAACTCGCTTTC-CTT-GGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGG 40898
Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101
| || || || || |||| | ||| |||| || |||||||| | ||||| |
Sbjct 40897 TTTCGGAGTGGATGTTCTCGAT-CGCGATCTGGAACCCGTAGAAACTCTTGGCCTCCGGG 40839
Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161
||||| || || | || || ||| | | | || || ||||||| ||||| ||||||
Sbjct 40838 ATCTGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCG 40779
Query 75162 GCGAAAAAAGCCAGTAC 75178
||||| || || || ||
Sbjct 40778 GCGAAGAAGGCAAGCAC 40762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547212942430600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |