Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq224 161 1e-34
seq201 129 7e-25
seq57 123 3e-23
seq235 113 5e-20
seq35 95.1 1e-14
>seq224
Length=1007144
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| |||||||| || | || || |||||||| ||| | ||||| || || |
Sbjct 62281 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAGACTATCACTTTAGAGGTCGAATCTTCT 62222
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| ||||| ||| || ||||||||||| || ||||| |||||||||
Sbjct 62221 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAG 62162
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | ||||| |||||||| ||||| ||||||| | || || ||||||| ||
Sbjct 62161 CAGAGATTGATTTTCGCTGGTAAACAACTGGAGGATGGAAGAACTCTGTCAGACTACAAC 62102
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| || ||||||||||| |||||||| | || | |||||
Sbjct 62101 ATTCAAAAAGAGTCCACTCTTCACTTAGTCTTGAGACTAAGAGGTGG 62055
Score = 145 bits (160), Expect = 9e-30
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || || |||||||||||| | ||||| || || |
Sbjct 62965 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 62906
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | || | ||| | ||||| ||||||||||| || |||||||| |||||
Sbjct 62905 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 62846
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | ||||| |||||||| ||||| || || | | | || || | || || ||
Sbjct 62845 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAAC 62786
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||||||||||||
Sbjct 62785 ATTCAAAAGGAATCCACTCTTCA 62763
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| ||||| ||||| ||
Sbjct 461337 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 461396
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| |||| ||||| |||||||| || ||||| || |||||
Sbjct 461397 GACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAA 461456
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || || | | || | | ||||| ||
Sbjct 461457 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAAC 461516
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| |||||| | || | ||||||
Sbjct 461517 ATCCAAAAGGAGTCCACTTTACACTTGGTCTTG 461549
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || |||||||| || || || || |||||||| ||| | ||||| || || |
Sbjct 62737 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCT 62678
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| ||||| ||| || ||||||||||| || ||||||||||||||
Sbjct 62677 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAA 62618
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | |||||||| ||||| || | || |||| | | || || | || || ||
Sbjct 62617 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAAC 62558
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||| || |||||
Sbjct 62557 ATTCAAAAGGAATCTACCCTTCA 62535
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || |||||||| || || ||||| ||||| || || | |||||||| | |
Sbjct 62509 ATGCAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCT 62450
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| |||| || ||||||||||| || |||||||| |||||
Sbjct 62449 GACACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 62390
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | ||||| |||||||| ||||| || || | | | || ||| | || || ||
Sbjct 62389 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAAC 62330
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||| || |||||||||||
Sbjct 62329 ATTCAAAAAGAGTCCACTCTTCA 62307
>seq201
Length=186330
Score = 129 bits (142), Expect = 7e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|||||||| || | || || ||||| || ||| | || ||||| || ||| | |||
Sbjct 46823 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46882
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || || ||||| ||||| || | ||
Sbjct 46883 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46942
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | ||| | | ||||| || ||||||||
Sbjct 46943 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 47002
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||| | ||| ||||||||
Sbjct 47003 GAATCCACTTTACATTTAGTCTTG 47026
>seq57
Length=156688
Score = 123 bits (136), Expect = 3e-23
Identities = 288/432 (67%), Gaps = 17/432 (4%)
Strand=Plus/Minus
Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC---- 81368
|||| |||||| | |||||| |||||||||||||||| | | ||| | | ||
Sbjct 58682 TCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGT 58623
Query 81369 --CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426
|||| || |||| |||| |||||||| ||||| ||| || ||||| | |||
Sbjct 58622 CTCTTGTTAC---CACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATG 58566
Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486
|| || | || | ||| |||||| ||||| | ||| || || ||| || |
Sbjct 58565 GGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATA 58506
Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATG 81546
||| |||| |||||| | ||||||| ||| |||||| |||||| ||||
Sbjct 58505 TTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAA 58446
Query 81547 GTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATC 81606
|| || ||||| || || ||| || | |||||| ||| || |||||| |||||
Sbjct 58445 GTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATT 58386
Query 81607 TGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTT 81666
||||| | | |||||||| || ||||| |||| ||||| |||| || |
Sbjct 58385 TGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAAC 58326
Query 81667 GACATCAGGTCATAGGTTTCCTTGACGCGTGGA----ATATCGTCACCGTGAATACCGAT 81722
||||||| || || || ||| | || ||| |||||| ||||||||||| |
Sbjct 58325 GACATCAAGTTGTAAGT---CTTCA-GCACGGACTCGATATCGCTGCCGTGAATACCTAG 58270
Query 81723 AGCTACACGCAT 81734
|| ||||||||
Sbjct 58269 GGCCACACGCAT 58258
>seq235
Length=640350
Score = 113 bits (124), Expect = 5e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| | || || ||||| || ||||| || ||||| || ||| | |||
Sbjct 599350 CTTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCAT 599291
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
|| ||| | || | || ||||| ||||| || || || || || ||||| || | |
Sbjct 599290 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 599231
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| ||||||||||||||| | || || | | | ||| | | ||||| || | |||||
Sbjct 599230 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 599171
Query 27594 GGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| | ||| ||||||||
Sbjct 599170 GGAATCCACTTTACATTTAGTCTTG 599146
>seq35
Length=195003
Score = 95.1 bits (104), Expect = 1e-14
Identities = 277/419 (66%), Gaps = 21/419 (5%)
Strand=Plus/Minus
Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC----- 81366
|||| ||||| | ||| || || ||||||||||||| ||| | || | | ||
Sbjct 50715 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 50656
Query 81367 CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426
| |||| | |||||||||| || ||||||||||| ||| || ||||| | ||||
Sbjct 50655 CTCTTGTTA---CCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATA 50599
Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486
|| || | || | || ||||||||||| | || || || | || || |
Sbjct 50598 GGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATG 50539
Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACACCGGTTCA 81544
||| || ||||| || ||||| | || ||| |||||| |||||| ||||
Sbjct 50538 TTGTGAATATGTAGACCAATACCACC--AGCAGTTTTGGAAATCAAAGCACATTCCTTCA 50481
Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604
|| || || || || || ||| ||| | ||||| ||| | ||||||| ||||
Sbjct 50480 AAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACA 50421
Query 81605 TCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGT 81664
| ||||| || || || || ||||| | ||||| | |||||| | || || |
Sbjct 50420 TTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTA---TT 50364
Query 81665 TT---GACATCAGGTCATAGGTTTCCTTGA-CGCGTGGAATATCGTCACCGTGAATACC 81719
|| ||||||| || |||||||| || || || ||| | ||||||||||||||
Sbjct 50363 TTAGGGACATCAAGTTATAGGTTT-CTAGAGCGGCCTCAATGTTATCACCGTGAATACC 50306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570307213390640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |