Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq369 1263 0.0 >seq369 Length=3799 Score = 1263 bits (1400), Expect = 0.0 Identities = 1952/2746 (71%), Gaps = 59/2746 (2%) Strand=Plus/Minus Query 38707 CGAGTCGAACGCACCGGCCTTGATCAAGGACTCGATGGCGCGCTTGCT---CACGGTGGC 38763 ||||||||||||||| |||||||| | |||||||||| ||||||| | ||| ||| Sbjct 2923 CGAGTCGAACGCACCTGCCTTGATGAGCGACTCGATGGTGCGCTTGTTGCACACCACGGC 2864 Query 38764 CTGAGTCGCTGCCTTCAAGAAGTCCGGCAGGGAGGTGAACTTCCCCCAGGCTTCCCGCAG 38823 | | | || | | |||||| | | || |||||| ||| | || ||| | Sbjct 2863 CGGCACCT-TGTCG--AGGAAGTCGGTGAACGACGTGAACGCGCCCTTCTCCTCGCGC-G 2808 Query 38824 TTCGGC-GATCTCGGCGACCATGCCCTCGCCCACGTTCTTCACGGCGGTCAGTCCGAAGC 38882 | ||| |||| || |||| | | | |||| ||||| |||| | || || ||||||| Sbjct 2807 TGCGGATGATCGCGTCGACGACGTTCGCGCCGACGTTGCGCACGCCCGTGAGGCCGAAGC 2748 Query 38883 GGATCTCGCTCTCCCCGTTCGGGGTGAAGGA-GCTGTTCGAGACCGACACGTCGGGCGGC 38941 |||| |||| || | || |||||| || | |||| | |||||| ||||| Sbjct 2747 GGATGTCGCCGCCCAC---CGCGGTGAACTTCGCCGC-CGAGTCGTTCACGTCCGGCGGG 2692 Query 38942 AGGACCCGCAGGCCCATGCGCCGCGCCTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCG 39001 || || | | ||||||||| |||| |||||| ||||| ||||| ||||||| Sbjct 2691 AGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAGCTTGTCCTTGTCG 2632 Query 39002 TCGCCCACCGAGGTG-AGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTA 39060 |||| ||| | || || | |||||||||||||| | |||||||| || ||| ||| | Sbjct 2631 TCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGTTCGCCTTGAGGAA 2573 Query 39061 CGCCGTGCGGTAGGCGATGAGCCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCC 39120 |||||| | ||| || | ||| |||||| | || ||||||||||||||||||||||| || Sbjct 2572 CGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCGTAGCC 2513 Query 39121 GGCGAAGGGTACGAGCACGTCCCACACCGCCTGGATGGCGCTGTCCGAGTAGCCTCGCTC 39180 ||||| || || ||| |||||| ||||||||||| ||| ||| ||||| || ||||| Sbjct 2512 CGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGGAGTACCCGCGCTC 2453 Query 39181 GCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCC 39240 || ||| |||||| ||||||||||||| | || | ||| |||||||||||| Sbjct 2452 CCGGCAGCCCGCCTGGAACGGCACGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCC 2393 Query 39241 CATGGCCCGACGCAGCAGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAGGATCTGCGCCGC 39300 ||| || || ||||||||||||||||| || || ||| || |||||||||||||| || Sbjct 2392 CATCGCGCGCCGCAGCAGGTCGGCCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGC 2333 Query 39301 CTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGTACGTCGGGTCCAGGATCTCCCGCAG 39360 | |||| |||||||||||||||| |||||| ||||| ||| ||| ||||||||| || Sbjct 2332 CCTCTGGACCTGCTCCTGGTAGACGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAG 2273 Query 39361 GGGCTCCTCCACCTCGGGGTGAATCGGCGAGATCGCCTGCTGTCCATTCTTCCGGAGGGC 39420 ||||| ||| | ||| ||||| || ||| |||| |||| | || ||||| || || || Sbjct 2272 GGGCTGCTCGAGCTCCGGGTGGATGGGCTCGATCTTCTGCAGCCCGTTCTTGCGCAGCGC 2213 Query 39421 ATAGTTCGTGTGTGAGCCAACGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCCGA 39480 ||||||||||| ||| | ||||||||| ||||| ||||||||||||| ||||||||| Sbjct 2212 GTAGTTCGTGTGCGAGTTCATGCCCATCGGGCCCGGGCGGTACAGCGCGATGACGGCCGA 2153 Query 39481 GATGTCCTCGAAGTTGTCGGGCTTCAGCAGGCGGAGCAGGGAGCGCATCGCACCGCCGTC 39540 || ||| ||||| ||||| ||||||| | |||| || || | |||||| | |||||||| Sbjct 2152 GAGGTCGTCGAACTTGTCCGGCTTCATCTGGCGCAGGAGCGCGCGCATGGGGCCGCCGTC 2093 Query 39541 GAGCTGGAACACCGAGAGCGTGTCACCCTTGGCCAGCAGCTCGTAGGTCGGGGCGTCGTC 39600 |||||||||||| |||||||||||| || ||||||||||| | || |||||| Sbjct 2092 GAGCTGGAACACGCCGAGCGTGTCACCGCGCGCGAGCAGCTCGTACGACGCCTTGTCGTC 2033 Query 39601 CAGCGGGATGTTCTCCAGGTCGACGTGCTCCCCACGGTTACGACGGATGTTCTCGACGGC 39660 |||| || ||| | |||| ||||| | ||| ||||||||||| || Sbjct 2032 GAGCGTGAGCGACTCGATCTCGATCGGCTCCTTGCCGTTCATCTCGATGTTCTCGAGCGC 1973 Query 39661 GTCGCCCATGATCGTGAGGTTCCGCAGGCCGAGGAAGTCCATCTTGACCGCGCCCATGCT 39720 |||| | | |||||||||||||||||| ||||||||||||||||||| ||| | || Sbjct 1972 GTCGTCGAGGATCGTGAGGTTCCGCAGCCCGAGGAAGTCCATCTTGATGAGGCCGAGGCC 1913 Query 39721 CTCGCACTGGGGGTAGTCCCACTGCGTGACGGTGACGCCGTCCGCAGGACGGACCCACAC 39780 |||| || |||||||| |||| |||| | |||||||| ||||||| | | Sbjct 1912 CTCGGACGTCGGGTAGTCGAACTGGGTGATGACCGCGCCGTCCTGAGGACGGCGCATGAT 1853 Query 39781 CGGAAGGTGATCGACCAGGGGCTCGTTGGACATGATCACACCGGCCGCGTGCACGCCCAT 39840 ||| | | |||| || || ||| | |||||||| || || ||||||||||||||| Sbjct 1852 CGGGATGATGTCGATGAGCGGGTCGCTCGACATGATGACGCCCGCCGCGTGCACGCCCCA 1793 Query 39841 CTGGCGAACCAGACCTTCGAGCCCGAGCGCAGTGTCGATCACCTCCTTCGAGTCCTTGTC 39900 ||| || ||| || |||| || |||| |||| || || || ||| ||| Sbjct 1792 CTGCCGCTTCAGCCCCTCGATACCCCGCGCGAGCTCGACGACGCGCTGCGCCTCCGGGTC 1733 Query 39901 GTTCTCGTACAGGCCCCGGATCTCGCCCGCCTCGTCGTAGCGCGGGTGCTCCGGGTTGAA 39960 | | |||| || |||| ||| |||||||| ||| ||| ||||| |||| ||| Sbjct 1732 GGTGTCGTGGAGCTGACGGAACTCCGCCGCCTCGGAGTACCGCTCGTGCTTGGGGTCGAA 1673 Query 39961 GATCCCCTCCAGGGGCATCGACGCGCCCATCACATCGGCCGGGTACGCCTTGGTCAGCTT 40020 ||||||| |||||| || | ||||||||| | | ||| ||||||||| ||||| Sbjct 1672 GATCCCCGACAGGGGGATGTCCTTGCCCATCACGGCCGGCGGCATCGCCTTGGTGAGCTT 1613 Query 40021 CTCGCCGACCTGGAAGGGCTTGTCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGC 40080 ||| || | | |||||| | | || | || |||| |||||| | ||| | || Sbjct 1612 CTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGCCGAGTCCTTGAGCGCCTGCTTGGC 1553 Query 40081 CTTGATCCGGCCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGAC 40140 |||||| |||| |||| ||||||| ||||| |||| | ||||||||||| ||||| Sbjct 1552 CTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCGGTCGTCGCCGTACTTCTCCGTGAC 1493 Query 40141 GTACCGGATGACCTCGCCGCGACGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGA 40200 ||||||||||||||| ||||| || || || |||||||||| ||| ||||||||||| || Sbjct 1492 GTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAAGTCGACGTCGACGTCGGGCATCGA 1433 Query 40201 CACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTC 40260 ||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || Sbjct 1432 CACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAGCCCGTGCTCCAGCGGGTCGAGCTC 1373 Query 40261 GGTGATCCCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGAC 40320 |||||| || | | ||||| | ||| || || || |||||||| || || || ||||| Sbjct 1372 GGTGATGCCCATGAGGTAGGAGGCCATGGAGCCCGCGGCCGAGCCACGGCCCGGGCCGAC 1313 Query 40321 CCACACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGG 40380 | | ||| | |||||||||||| ||||||||||||||| || |||||||| ||| Sbjct 1312 GCGGATGCCCTGGTCCTTGGCCCAGTTGATGAAGTCGGCGACCACGAGGAAGTACCCCGG 1253 Query 40381 GAAGCCCATCTGGATGATCATGTCGATCTCGTACTGGAGCTGCTTGCCGTGCTCGTAGTC 40440 |||||||||||||||||| | ||| |||||||||| |||||||| | ||| Sbjct 1252 GAAGCCCATCTGGATGATGACCTCGGTCTCGTACTGCGCCTGCTTGCGCGCCGCGTCCGG 1193 Query 40441 GGTCCCGTTCGGGAACCGTC-GAGCTGCCCCACGGTGGACCTCGTCCTCGAACCAGGTCA 40499 | | ||||| ||| |||| | | || | ||| || | ||||| | |||||||| || Sbjct 1192 GATGCCGTTGGGGTACCGGCGGTGCAG-CCCGCGCTCCACCTCCTTGACGAACCAGCTCG 1134 Query 40500 CCTCCGTGTGCCCCTCGGGCACCGGGAAGCGAGGCATG-AGGTCG---GTGTGCTCGAAC 40555 ||| | |||||||| || ||||| || |||||| || ||| ||| | |||| Sbjct 1133 TCTCGTCCTCGCCCTCGGGGACGGGGAACCGCGGCATGTAGTTCGCCTTCGTG-TTGAAC 1075 Query 40556 ATGCCCGTCGTGTCGACAC-GCTCGGCGATCTCCAGCGTGGT-CCGCATCCCCCACTCCC 40613 | | ||| ||| |||||||||| ||||||| | |||| | || | Sbjct 1074 -GACACCTCG------CACTGCTCGGCGATGAGCAGCGTGTTGTCGCA--CGCCTCGGGG 1024 Query 40614 AGATGGGAGAGGAGTCGATGGCCGCCATCTCGGCGGCCGTCTTGATGTAGTACCCGGAGC 40673 || | | || || | ||| ||||||||| || | ||| | |||||| |||| || Sbjct 1023 AGCTCCGCGAAGACCC---GGC--GCATCTCGGCCGCTGACTTCACGTAGTAGCCGGTGC 969 Query 40674 CCTCGAACCGGAAGCGGTTCGGGTTGTCGAGCGTGGTGCCGGTCTGGA-CGCAGAGTAGG 40732 | |||||| ||| |||| ||||| ||||||||| | ||||| | || ||| || || Sbjct 968 CGTCGAACTTGAACCGGTCCGGGTCGTCGAGCGTCGAGCCGGAGTTGATCGC-CAGCAGC 910 Query 40733 GCATCGTGCGCCTTGCTCTCGTCGGCCGTG---ACGTAGTGGCTGTCGTTGGTGACCACC 40789 || || || || || |||| || | ||||||||| |||||| || | | | Sbjct 909 GCCTCCTG-GC--TGGAGGCGTCCTCCTCGCGCACGTAGTGGAGGTCGTTCGTCGCGA-C 854 Query 40790 GGGGTGAGCG-CGAGGTGCTTGCCCAGCCGGTAGAGGTCGTCGCGGACGCGCCGCTCGAT 40848 | || | ||| ||| | || | || || |||||| | ||| ||| |||||| Sbjct 853 GAGGCGCGCGCCGATGGTCTCCGCGAGGCGCAGGAGGTCCTTCGTGACCCGCGTCTCGAT 794 Query 40849 CTCCAGGCCGTGGTCCATGATCTCCAGGAAGTACCGGTCACGACCGAACACCTCCAGGTA 40908 || | ||||||||||||| ||| | |||| | || || ||||| | ||| || Sbjct 793 GTCGATCCCGTGGTCCATGAGCTCGACGAAGAAGTTCTCGCGGCCGAAGATGTCCTGGAG 734 Query 40909 CCGGCCAGCC-TCCGCAACGGCCTGGTCGTACTGCCCGAGGTTGAGCCGGGTCATGATCG 40967 | ||| ||| ||||| || |||| ||| |||| |||||| || || ||| |||| Sbjct 733 CTCGCCCGCCGTCCGC-ACCGCCTCGTCCCACTGTCCGAGGCGCAGGCGCGTCTGGATCT 675 Query 40968 CACCGCCAGGGCAGCCCGTGGTGACGATCAGGCCCTCGTTGTGCTCGGCGACGAGGTCGA 41027 | || ||||| || | || ||| ||||||| | || | || ||||||| Sbjct 674 CGCCCGACGGGCACCCGCTCGTCGCGACGAGGCCCTTGCCGTACCGCTGGAGGAGGTCGC 615 Query 41028 AGTCCATGCGCGGGTACTTCCCGAGCAGGCCCTCTTGGTACGACCGAGAGCTGA--GCTT 41085 |||||||||||| |||| || | | | ||||| | ||| |||| | || | Sbjct 614 GGTCCATGCGCGGCCACTTGCCCATCTGCCCCTCGAGCGACG--CGAGCGACGACGCCCG 557 Query 41086 CATGAGGTTGTGCAGGCCGGTCTTGTTCTCGGCGAGGATCGTGAGGTGGGTGTACGCACC 41145 | ||||||||||| || |||| || ||||| | ||| | ||| ||||||||||| Sbjct 556 GAACAGGTTGTGCAGACCCTCGTTGTCCTTCGCGAGCAGCGTCATGTGCGTGTACGCACC 497 Query 41146 GCGACCGCTCACGTCGTAACGCTTCTGGTCCTCGGTGCCC-CACTGCACCCGCTCCTGAT 41204 ||| | ||||||| || ||| ||| | ||||| || |||| || ||| | Sbjct 496 GCGCGCCGAGACGTCGTCGGACTCCTGCCCCT-GCTGCCCGAACCGCACGCGGGTCTGGT 438 Query 41205 CGAA---GCGCGAGCCCGGAGCCATGTACGCCTCGATGCCGATGATCGGCTTGACCCCAG 41261 |||| || || |||||| | | ||||||||||| ||||||||||||||||| || Sbjct 437 CGAACCGGCTCGTGCCCGGCGTGACGTACGCCTCGACGCCGATGATCGGCTTGATGCCCT 378 Query 41262 CGGCCGTAGCTGTGGTGAAGAAGTCGTGCGCACCGTGCAGGTTGCCGTGGTCGGTGACGG 41321 ||| || | |||| ||| ||| ||| || || ||||||||| || | Sbjct 377 TCGCCTGCGCCCGCGACCAGAACTCGAACGCCCCGAACACGTAGCCGTGGTCCGTCGTCG 318 Query 41322 CGACTGCCGGGGAGCCCTGGCGGGCGACCTCGGCGACCATCTGCTTCATCCGAGCGGCCC 41381 ||| ||| ||| |||| |||||||| ||| || | | ||||| || || | Sbjct 317 CGATGGCCTTCTGCCCCAGGCGCTCGACCTCGTCGAACAGGTCCCCGATCCGGGCCGCGC 258 Query 41382 CGTCGAGGAGGCTGTACTCGGAGTGGTTGTGGAGGTGAACGAACTC 41427 |||| || | |||||||| |||| ||||||||| ||||| || Sbjct 257 CGTCCAGCATCGAGTACTCGGTGTGGACGTGGAGGTGGACGAAGTC 212 Score = 86.0 bits (94), Expect = 2e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 38497 CTCGACCCCGGCCAGCGGGTGGTCGGAGACGTACAGGCCCAGCATCTCCCGCTCGATGGA 38556 ||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||| | Sbjct 3175 CTCGAGCCCGGACAGCGGGTGGTCGGAGACGTACAGGCCGAGCATCTCGCGCTCGAACGC 3116 Query 38557 GAGAAGCGGACCCTTCGCCCAGTCC 38581 ||| || | ||| |||||||| Sbjct 3115 GAGGCGCTGCTTCTTGTCCCAGTCC 3091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160405548542778