Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq224 172 1e-37
seq201 159 8e-34
seq338 89.7 1e-12
seq35 86.0 1e-11
>seq224
Length=1007144
Score = 172 bits (190), Expect = 1e-37
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||||| ||| | ||| |||||||| |||||||| | ||||| || | || ||||||
Sbjct 62064 AGTCTCAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGACAGAGTTCTT 62123
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || || || || |||||||| || | || || ||||| || ||||||||||||
Sbjct 62124 CCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGAATACCTTCC 62183
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||||||| || |||||||| || | ||| || ||||| |||
Sbjct 62184 TTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCTAAAGTG 62243
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || || |||||||| | || | ||||||
Sbjct 62244 ATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | |||||| || ||||||| ||||| || | ||||||||| ||
Sbjct 461552 TCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 461493
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 461492 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 461433
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| ||| ||| || ||||||||||| | ||| || || | || ||
Sbjct 461432 GTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAAT 461373
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || ||||| || | ||| | |||||| ||
Sbjct 461372 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 461334
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||| ||||| | ||| || || ||||| ||||| | |||||||| | || |||||
Sbjct 62520 AGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTA 62579
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| | ||| || || || || || | || |||||||| || ||||||||||||
Sbjct 62580 CCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCC 62639
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||||||| || |||||||| || | ||| || || || |||
Sbjct 62640 TTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTG 62699
Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698
|| ||||| || || | ||||||
Sbjct 62700 ATAGTCTTACCAGTTAGAGTTTT 62722
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || ||||| | ||| |||||||| |||||||| | |||||||| | | |||||
Sbjct 62292 AGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTA 62351
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| ||||| || || || |||||||| || | | |||||||| || ||||||||||||
Sbjct 62352 CCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCC 62411
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| || ||||||||||| || ||| || || || ||
Sbjct 62412 TTGTCCTGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTT 62471
Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698
|| ||||| || |||| ||||||
Sbjct 62472 ATGGTCTTACCGGTCAGAGTTTT 62494
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || ||||| | ||| ||||||||||| ||||| | |||||||| | || |||||
Sbjct 62748 AGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTA 62807
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| ||||| || || || |||||||| || | | |||||||| || ||||| ||||||
Sbjct 62808 CCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCC 62867
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| ||||| || ||| || ||||| || || || | ||| || || || ||
Sbjct 62868 TTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTA 62927
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || |||| || || | ||| | ||||||
Sbjct 62928 ATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 62965
>seq201
Length=186330
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | || | ||||||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 47029 TCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 46970
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 46969 GTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTT 46910
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| |||||| ||| ||| || || ||||| || | ||| || || || |||||
Sbjct 46909 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 46850
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || |||||||||||
Sbjct 46849 GGTCTTACCAGTCAAAGTTTT 46829
>seq338
Length=6541
Score = 89.7 bits (98), Expect = 1e-12
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794
|||||||| ||||| ||||| ||| |||||| || ||| |||| |||||| | | |
Sbjct 5316 TTGGTAAGGTTCTTCGCGTTGCATCGAATTAATCCGCATGCTCCGCCGCTTGTGCGGGCC 5375
Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
|||||| || |||||||||||| |||||||| |||| | | |||| ||
Sbjct 5376 CCCGTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGG 5424
>seq35
Length=195003
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || || ||||| || || |||||||| |||||||||||
Sbjct 168293 GAAAATTTGACCATCTGTAATGGAAATGACATTAGTTGGAATATAAGCCGAAACATCACC 168352
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTA 4561
|||| || || | |||||| | ||| ||||
Sbjct 168353 ACCTTGGGTCTCAATAACAGGCAGGGCAGTTA 168384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192524370150218
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |