Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq235 161 2e-34
seq224 161 2e-34
seq201 158 3e-33
>seq235
Length=640350
Score = 161 bits (178), Expect = 2e-34
Identities = 155/196 (79%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| ||| ||| ||||| ||||||||||| | |||| || | || || || | ||
Sbjct 599155 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAATT 599213
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
| || || ||||||||||| | |||||||||| || ||||| || |||||||| ||||
Sbjct 599214 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGAATCT 599273
Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074
| | ||| || | || || ||||| |||| ||| ||||| |||||||| |||||||| |
Sbjct 599274 TGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGTCTTACCAG 599333
Query 283075 TCAAAGTCTTAACGAA 283090
||||||||||||||||
Sbjct 599334 TCAAAGTCTTAACGAA 599349
>seq224
Length=1007144
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| || ||||||||||||||||||| | || | ||| || ||
Sbjct 461545 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 461486
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | |||||||||| |||||||| |||||||||||
Sbjct 461485 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 461426
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||| ||||| || || || ||||||
Sbjct 461425 ATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 461366
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || |||||||| ||||| || ||||| ||
Sbjct 461365 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 461334
Score = 138 bits (152), Expect = 2e-27
Identities = 145/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|||||||| ||||||||||| | || || | |||||||| |||||||| || || ||
Sbjct 62091 TCTTTTTGAATGTTGTAGTCTGACAGAGTTCTTCCATCCTCCAGTTGTTTACCAGCGAAA 62150
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | || ||||| |||||||| |||||||| |||||||| || || |
Sbjct 62151 ATCAATCTCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTG 62210
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| |||| |||||| || | |||||| |||||||| || ||||| || ||
Sbjct 62211 TCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACA 62270
Query 283089 AATATCTGCAT 283099
|| || |||||
Sbjct 62271 AAAATTTGCAT 62281
>seq201
Length=186330
Score = 158 bits (174), Expect = 3e-33
Identities = 154/196 (79%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| ||| ||| ||||||||||||||||||| |||| || | || || || | ||
Sbjct 47017 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATT 46959
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
| || || |||||||| || | |||||||||| || ||||| ||||||||||| ||||
Sbjct 46958 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCT 46899
Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074
||| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| |
Sbjct 46898 TTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 46839
Query 283075 TCAAAGTCTTAACGAA 283090
||||||| || || ||
Sbjct 46838 TCAAAGTTTTGACAAA 46823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046733205128338
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |