Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq224 136 1e-26
seq235 127 5e-24
>seq224
Length=1007144
Score = 136 bits (150), Expect = 1e-26
Identities = 154/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || |||||||| || || || || || ||| | ||||| ||| || |||
Sbjct 62506 CAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCTGAC 62447
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| ||||| || ||||||||||| ||
Sbjct 62446 ACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAACAG 62387
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || ||||| || ||||| || ||||| || || || || | ||||| ||| |
Sbjct 62386 AGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAACATT 62327
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|||||||| || || || || ||||
Sbjct 62326 CAAAAAGAGTCCACTCTTCA-CTTG 62303
Score = 120 bits (132), Expect = 7e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||||| || || ||| ||||||
Sbjct 461340 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCAGAC 461399
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || ||||| |||||||| ||||| ||||| || || || ||||| |||
Sbjct 461400 ACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAACAA 461459
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || || | ||||| || || ||| | | || || ||| ||
Sbjct 461460 AGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAACATC 461519
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || | || | || |||||| | |||
Sbjct 461520 CAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGA 461558
Score = 118 bits (130), Expect = 3e-21
Identities = 150/205 (73%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || || || || | ||||| ||| || ||
Sbjct 62962 CAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCTGAT 62903
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| || || |||||||| ||||| || ||||||||||| ||
Sbjct 62902 ACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAACAG 62843
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || ||||| || ||||| || ||||| || || || || | ||||| ||| |
Sbjct 62842 AGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAACATT 62783
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| ||||| || || || ||||
Sbjct 62782 CAAAAGGAATCCACTCTTCA-CTTG 62759
>seq235
Length=640350
Score = 127 bits (140), Expect = 5e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || ||| | || || || || ||||| || || || ||| || ||||||||
Sbjct 599349 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 599290
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || |||||| |||||||| ||||||||||| ||||| || ||||| ||| || |
Sbjct 599289 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 599230
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAA 178108
||||| || || || || | ||||| || || || |||| |||| || ||| | |||||
Sbjct 599229 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAAC-CTTGTCCGACTACAACATTCAAAA 599171
Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || | ||| | || |||||| | |||
Sbjct 599170 GGAATCCACTTTACATTTAGTCTTGAGATTGAGA 599137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203724306005718
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |