Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq224 102 8e-17 >seq224 Length=1007144 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | ||| | || |||| || || ||| ||||| |||||||| || || || Sbjct 62739 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGAC 62798 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | |||| || || || || || ||||| |||| | ||||||||||| ||| Sbjct 62799 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 62858 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| |||||| ||| ||| | | | ||| || || || || Sbjct 62859 ATGCCTTCCTTGTCCTGGATTTTGGACTT-GACGTTGTCGATAGTATCAGAAGATTCGAC 62917 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || ||||| ||||| ||||| |||||||| ||||| Sbjct 62918 CTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 62965 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/232 (69%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | ||| | || |||| || || ||| ||| || |||||||| || || || Sbjct 62283 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGAT 62342 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | |||| || || || || || ||||| |||| | ||||||||||| ||| Sbjct 62343 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 62402 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810 | | ||||||||| ||| || ||| | | | ||| | ||||| | | Sbjct 62403 ATACCTTCCTTGTCCTGGATCTTAGACTTGACGTTATCGATG-----GTGTCAGAATATT 62457 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| ||||| || ||||| ||||| || || || ||||||||||| Sbjct 62458 CAACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 62509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301416876400