Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq19 109 5e-19 seq17 93.3 3e-14 seq26 84.2 2e-11 seq13 84.2 2e-11 >seq19 Length=306686 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || |||||||| ||| |||| || || || || || || |||||| ||| ||| | Sbjct 8665 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8724 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 |||| || | | | || ||||| || ||| || || |||||| | || || Sbjct 8725 TCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 8784 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 ||||||||| | |||||||| || || ||||||||||| || |||| || | || ||| Sbjct 8785 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 8844 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || |||||||| || ||| | ||| |||| || |||| |||| || Sbjct 8845 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8894 >seq17 Length=149906 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || |||||| | || ||| ||||| ||| | || ||||| || |||||| ||||| Sbjct 121857 GACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGGAAACAACTGGAA 121798 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| | ||| || | |||||||| ||||||||||||||||| |||||| |||| | Sbjct 121797 GATGGTAGAACGCTGTCGGATTACAACATTCAAAAGGAATCTACCCTTCACTTGGTCCTG 121738 Query 25248 CGATTACGAGGAGG 25261 || || |||| || Sbjct 121737 AGACTAAGAGGTGG 121724 >seq26 Length=324517 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || ||||||||| | || || ||||||||| | |||||||| || || ||||||||| Sbjct 285999 GACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 285940 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 || | ||| || |||| ||||| |||||||||||||| ||| | || | || || Sbjct 285939 GACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGTCTTG 285880 Query 25248 CGATTACGAGGAGG 25261 |||| |||| || Sbjct 285879 AGATTGAGAGGTGG 285866 >seq13 Length=204060 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107 ||||||| ||||| || || ||||| || ||| ||| | | || || | | | Sbjct 46713 TCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACA 46772 Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167 || ||||| ||| ||| || || |||||| | || || ||||||||| | |||| Sbjct 46773 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTAATCT 46832 Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227 |||| || || ||||||||||| | ||| || | || ||||| || |||||||||| Sbjct 46833 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAAT 46892 Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 | ||| | || | || || |||| |||| || Sbjct 46893 CCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 46926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796529644356