Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq19 109 5e-19
seq17 93.3 3e-14
seq26 84.2 2e-11
seq13 84.2 2e-11
>seq19
Length=306686
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| |||| || || || || || || |||||| ||| ||| |
Sbjct 8665 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8724
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
|||| || | | | || ||||| || ||| || || |||||| | || ||
Sbjct 8725 TCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 8784
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
||||||||| | |||||||| || || ||||||||||| || |||| || | || |||
Sbjct 8785 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 8844
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||| || ||| | ||| |||| || |||| |||| ||
Sbjct 8845 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8894
>seq17
Length=149906
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| || |||||| | || ||| ||||| ||| | || ||||| || |||||| |||||
Sbjct 121857 GACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGGAAACAACTGGAA 121798
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247
||| | ||| || | |||||||| ||||||||||||||||| |||||| |||| |
Sbjct 121797 GATGGTAGAACGCTGTCGGATTACAACATTCAAAAGGAATCTACCCTTCACTTGGTCCTG 121738
Query 25248 CGATTACGAGGAGG 25261
|| || |||| ||
Sbjct 121737 AGACTAAGAGGTGG 121724
>seq26
Length=324517
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| ||||||||| | || || ||||||||| | |||||||| || || |||||||||
Sbjct 285999 GACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 285940
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247
|| | ||| || |||| ||||| |||||||||||||| ||| | || | || ||
Sbjct 285939 GACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGTCTTG 285880
Query 25248 CGATTACGAGGAGG 25261
|||| |||| ||
Sbjct 285879 AGATTGAGAGGTGG 285866
>seq13
Length=204060
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107
||||||| ||||| || || ||||| || ||| ||| | | || || | | |
Sbjct 46713 TCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACA 46772
Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167
|| ||||| ||| ||| || || |||||| | || || ||||||||| | ||||
Sbjct 46773 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTAATCT 46832
Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227
|||| || || ||||||||||| | ||| || | || ||||| || ||||||||||
Sbjct 46833 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAAT 46892
Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| ||| | || | || || |||| |||| ||
Sbjct 46893 CCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 46926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410796529644356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |