Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq27 96.9 3e-15
>seq27
Length=203299
Score = 96.9 bits (106), Expect = 3e-15
Identities = 295/449 (66%), Gaps = 13/449 (3%)
Strand=Plus/Plus
Query 44855 GAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCG 44914
||| || ||||||| |||||| ||||||| || |||||||| ||| || || |
Sbjct 141553 GAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTTTCCGGGTCCTTCGCCTCC 141612
Query 44915 ATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATT 44974
|| || | |||| | | || |||||||||| |||| || ||||||| ||||
Sbjct 141613 ATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTCTCCAACGAACTGATC 141672
Query 44975 TCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTCGAT 45034
| |||||||||||| |||||||| |||||||||| | | | | | | ||
Sbjct 141673 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGT----TGTTCGCCCACTTGAA 141728
Query 45035 CAA-AAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGAT 45093
|| ||| |||| | ||| |||| | | || || |||| ||||| | ||||| |
Sbjct 141729 AAACAAGCCGGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGA-AC 141787
Query 45094 GGAATTTTTTGCT-GAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATGA 45152
| | || || || || |||| | | ||| | || |||||||| | ||||||
Sbjct 141788 AAAGATACTTCCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAACGCCGACTTGATGA 141847
Query 45153 GAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATGT 45212
| ||| | ||||| ||||| || | ||| | ||| || ||| ||||| ||
Sbjct 141848 ACCAATACGTCGAGTTCGTCGCAGACAGACTTTTGGTCGCCTT-CGGTA--ACAAGAAGT 141904
Query 45213 ACTATA---CTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTA 45269
|||| | || ||||| ||||| || ||| | || ||||| |||| || || || |
Sbjct 141905 ACTACAAGGTCGACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGACCA 141964
Query 45270 AtttttttGAGAAACGCGTCGGCGAATAC 45298
| || || || || | ||| ||| |||
Sbjct 141965 ACTTCTTCGAAAAGAGAGTCTCCGACTAC 141993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830114485368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |