Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq27 201 1e-46
seq5 194 1e-44
seq4 190 2e-43
seq17 129 5e-25
seq26 91.5 1e-13
seq19 87.8 2e-12
seq13 87.8 2e-12
>seq27
Length=203299
Score = 201 bits (222), Expect = 1e-46
Identities = 420/617 (68%), Gaps = 8/617 (1%)
Strand=Plus/Plus
Query 57690 GTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTT 57749
||| | || || |||||||| ||||| ||||| || ||||| || |||||||| | ||
Sbjct 141274 GTGCTTGCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGAAAACTTGGTCGAGAACTTC 141333
Query 57750 TCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAA 57809
|| || || || | ||||||| | | || ||||| || || | || || ||
Sbjct 141334 TCCACCGAGGTCCAGATCCCGGAGGCCAAGAGTTTCTACGGGTTCCAGATCGCAATCGAG 141393
Query 57810 AACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAG 57869
||| | || || |||| || || | | ||||| || ||| | |||||| | | ||
Sbjct 141394 AACATCCACTCCGAAACCTACTCCTTGTTGATCGACACCTACATCAAGGACCCCAAGGA- 141452
Query 57870 AAACGTAGACT-GTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTG 57928
|| || || ||||||||| ||||| || || || | ||| | ||||||| || ||
Sbjct 141453 AAGCGAGTTCTTGTTCAACGCCATCGACACCATCCCAGAAATCTGCGAGAAGGCCGAATG 141512
Query 57929 GTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGC 57988
| | | | |||||| | |||| ||| ||||| || || || ||||||||||
Sbjct 141513 GGCCCTTAGATGGATCCAGGACGCCGATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGC 141572
Query 57989 CGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACG 58048
| || |||||||| | |||||||| || ||| || | || || ||| |||||||| |
Sbjct 141573 CTCCATCGAAGGTGTCTTCTTTTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAG 141632
Query 58049 CGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCA 58108
|| |||||||||| |||| || |||||| |||| | | ||||| ||| | ||
Sbjct 141633 AGGTATGATGCCCGGTTTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTTGCA 141692
Query 58109 TACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC-GACGC-GGGATCGC 58166
|| || ||||| || | ||| | | ||| | || || || ||| | | ||||
Sbjct 141693 CACCGACTTTGCCTGTTTGTTGTTCGCCCACTTGAAAAACAAGCCGGACCCAGCCATCG- 141751
Query 58167 ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCT 58225
|| | | || |||||||||| |||| ||||||| || || | || || ||| |
Sbjct 141752 -TCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGA-TACTTCCTAGACGCCTT 141809
Query 58226 ACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGC 58285
|| || ||| |||| ||||||||| || |||||| | ||| | ||||| || ||
Sbjct 141810 GCCAGTCGCCTTGCTAGGTATGAACGCCGACTTGATGAACCAATACGTCGAGTTCGTCGC 141869
Query 58286 CGACAGACTTTTGCTCG 58302
|||||||||||| |||
Sbjct 141870 AGACAGACTTTTGGTCG 141886
>seq5
Length=350035
Score = 194 bits (214), Expect = 1e-44
Identities = 430/640 (67%), Gaps = 4/640 (1%)
Strand=Plus/Minus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
||| || || |||| |||||||| || |||||||| || ||||| || | || ||
Sbjct 95674 TTCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCACG 95615
Query 23401 CACCTCCTCTTTGCCG-GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459
| || || || || | ||| ||| | | ||| | |||||| || | ||| |||||||
Sbjct 95614 AATTTCTTCCTTACCATGAGTT-TTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCC 95556
Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519
| ||||| | | ||| |||||| || || |||||||| || || || || || |||||||
Sbjct 95555 ATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAAC 95496
Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579
| || ||||| ||| | || | | ||| || | | || || || | ||| |
Sbjct 95495 GTGCAGTGTTATTGAATACACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTAC 95436
Query 23580 CCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCG 23639
| || | | || ||| | | |||| |||| | || | ||| | || || | |
Sbjct 95435 CTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAG 95376
Query 23640 ATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699
|| || ||||| || || | ||||| ||||||||| || || |||||| ||| || |
Sbjct 95375 TCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCCT 95316
Query 23700 TGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTG 23759
| | || | || |||||| ||||||||||| | | |||||| |||| || || |
Sbjct 95315 TCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGAG 95256
Query 23760 TCGGGCTGGCGTGCGTAAAGTATC-CATTCGACATTAGATTGTACGTGTCGATGGCGGCA 23818
| ||| ||||| || ||||||| || | ||||| | ||||| || | | |||
Sbjct 95255 TGGGGGAAGCGTGAGTGAAGTATCTCAAT-GACATCAAGTTGTAAGTCTTCAGCACGGAC 95197
Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878
|| ||||| ||||| ||||| | ||| || ||||| | || | ||| || | |||
Sbjct 95196 TCGATGTCGCTACCGTGGATACCCAGGGCCACACGCATGACCAGATGTTGGGGACGTTCG 95137
Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938
|| |||||| | | | | || || ||||||| || || || || || ||||||
Sbjct 95136 GCCACTTCGCCGTCTAGTCTTAGCAAGTAGGAACGTTCCAAAGTCTTGAACCCGAAATAG 95077
Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978
|| || || || | |||| ||| |||||||| ||||
Sbjct 95076 GTGTACTTGAAATCTCTGTCGTACACGATGGCCGAGTTCA 95037
>seq4
Length=66942
Score = 190 bits (210), Expect = 2e-43
Identities = 454/681 (67%), Gaps = 14/681 (2%)
Strand=Plus/Minus
Query 23264 GCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGG---CGATTGCATCGGACACATG 23320
|| ||||||||| ||||||| ||||| | ||| || |||| | ||| | |
Sbjct 59928 GCTTCAAATTCGTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATG---TAGGAGAGAAT 59872
Query 23321 AGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCG 23380
| | |||| | || | ||| || || |||| |||||||| || | |||||||||
Sbjct 59871 AAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCT 59812
Query 23381 TAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAG 23440
||| | || | || || | || || || ||| |||||| | | || | |||
Sbjct 59811 GGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAG 59752
Query 23441 TCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTG 23500
|| || | || || ||||| ||||| | || | ||||| || || |||||||| ||
Sbjct 59751 TCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTA 59692
Query 23501 CCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCG 23560
|| ||||| || || |||||||| ||||||||| | || | | ||| || | | |||
Sbjct 59691 CCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCG 59632
Query 23561 TTGGACGCGCCGCCTACG--CCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGT 23618
|| || | ||| | || || || | || || |||| |||| |||||||| |
Sbjct 59631 TTAGAAGTCCCG--TTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATAT 59574
Query 23619 GGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGA 23678
| | ||| || || || | | ||| || |||| || |||| |||| |||||||||||
Sbjct 59573 GTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGA 59514
Query 23679 TGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGG 23738
|||| || ||| || || || | || || | |||||| || |||||||| | || |
Sbjct 59513 TGCCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTG 59454
Query 23739 GCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGAT 23798
| ||| | || ||| | || || |||||| ||||||||| ||||| | |
Sbjct 59453 GTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGT 59394
Query 23799 TGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCA 23858
| || || || | ||||| ||||||| || ||||| ||||| | |||||| | ||| |
Sbjct 59393 TATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGA 59334
Query 23859 TCATGTATTGAGGTC--TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTG 23916
| | || ||| || | || | | ||| ||||| | | | || | || |||||||
Sbjct 59333 TTAAGTGTTGTGGACGTTCAGCAACTTGA--CCGTTGACTCTCAATAAGTACGAACGTTC 59276
Query 23917 CATCGTTTTAAATCCAAAATA 23937
| |||||||| || || ||
Sbjct 59275 TAAAGTTTTAAAACCGAAGTA 59255
>seq17
Length=149906
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| ||||| || || || || || | || || ||| | ||
Sbjct 122944 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 122885
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| | ||||| | ||| ||||||||||||| | || || |||||
Sbjct 122884 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 122825
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || |||||||| ||||| |||||||| || || | ||||| |||
Sbjct 122824 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAAC 122765
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| |||||||| |||| || || || || || ||||
Sbjct 122764 ATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGGTA 122716
>seq26
Length=324517
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| |||||| |||| || || || ||||| | || |||||| | || |||| |
Sbjct 286083 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 286024
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | |||||| | || ||||| ||||| | || || ||||| || | |
Sbjct 286023 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 285964
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| || ||||| || || ||||||||| || || || ||| || |||||||||||
Sbjct 285963 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 285904
Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| ||| | ||| | || | ||| |||| || ||||
Sbjct 285903 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTA 285864
>seq19
Length=306686
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| |||||| | || || || || || ||| | || |||||| |
Sbjct 8665 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8724
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | || | ||||| | || ||||||||||| | || || |||
Sbjct 8725 TCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 8784
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| || || ||||||||| | ||| || || ||
Sbjct 8785 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 8844
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| || || ||| | || |||| | ||| |||| || |||
Sbjct 8845 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGGT 8895
>seq13
Length=204060
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
||| || || ||| |||| || || || ||||| | || |||||| | || |||| | |
Sbjct 46708 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 46767
Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319
|| | ||||| || ||| | | |||||||||| | || || ||||| || |
Sbjct 46768 TGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCTCCTGACCAACAAAGAT 46826
Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379
|||| || ||||| || || ||||||||| || || || || || ||||| ||||
Sbjct 46827 TAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAA 46886
Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
| ||||| ||| | ||| | || | ||| |||| || ||||
Sbjct 46887 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTA 46928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766099107680
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