Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq4 170 2e-37
seq5 132 5e-26
>seq4
Length=66942
Score = 170 bits (188), Expect = 2e-37
Identities = 520/791 (66%), Gaps = 21/791 (3%)
Strand=Plus/Minus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|||| || |||| |||| | || || | || |||||||| ||||||||| || ||
Sbjct 61092 TCAATGGTAAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAATACATACCGGTC 61033
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
||||| || |||| ||||| ||||||||||| || || || | || || |
Sbjct 61032 TTTAGACCTTTCTTCCAACCGTAGAAATGCATACTTGTTAGCTTACCCATGGTTGGGGCA 60973
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCA 36967
| ||| ||| || || |||||| || ||||| | | |||||||||||
Sbjct 60972 CGCAAGAATAAATTCAAAGAATGGGATTGATCGATGTAAACGG--CACGGTCGGCTGCCA 60915
Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027
| | | ||| ||||| || || |||||||| || ||||| | | ||| | | |
Sbjct 60914 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTATACAAATCTTTCAATTCTT 60855
Query 37028 CTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATT-CTTTATG 37083
||||| | | ||| |||||| |||||||| ||| | | |||| ||| ||
Sbjct 60854 GTGGTACGTTTGGTAAACCTTGAATGGAACCATTTTGTGTGATTAGA-TATTGCTTCATA 60796
Query 37084 TCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143
||| || ||| ||| | | | || | || || || |||||| || || |||
Sbjct 60795 CCATCATCCCAAATACCCAAATCAACCAAATCACGCAGTAAGTATGGATTGACGACTTGA 60736
Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203
|| || ||||||| || | | | || || ||| |||| |||||| | ||||
Sbjct 60735 AATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGTTCGAAACACTCG 60676
Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTAT 37261
|| | || ||| || || || || |||||||||||||| ||||| || | ||| |
Sbjct 60675 TTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATGGTCAAAGAGT-- 60618
Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTT---AGTTCATTCCAATCCCATAAATCTG 37318
|||| | ||||| | | || || ||| | ||| || ||||||||| | | | |
Sbjct 60617 TTCTAACACCATGCTTCATGATG-TCATTTCTCAAAGT--ATCCCAATCCCACATACC-G 60562
Query 37319 TTGGGTTCTTTAACC-ACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTA 37377
| |||| || || |||| || |||| || ||||||| | |||||||| | |
Sbjct 60561 TAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGG 60502
Query 37378 TATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAA 37437
| || || || || || | ||| |||||| || ||| | ||| | | ||||
Sbjct 60501 AAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGG 60442
Query 37438 TATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAG 37497
|| || ||||| || ||||||||||||| || |||||||||| ||||||| |
Sbjct 60441 TACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGTCGAATGGTAAA 60382
Query 37498 CCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTC 37557
| ||| || || || ||||||||||| || ||||| | | | || || || ||| ||
Sbjct 60381 CGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTC 60322
Query 37558 TTATTAGATCT 37568
||||||||||
Sbjct 60321 ATATTAGATCT 60311
Score = 165 bits (182), Expect = 8e-36
Identities = 413/625 (66%), Gaps = 2/625 (0%)
Strand=Plus/Minus
Query 38010 TTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGT 38069
|| ||| || || | ||| || | ||| || ||||||| || | ||||||||| | |
Sbjct 59854 TTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGC 59795
Query 38070 TCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTG 38129
| |||||| || || ||||||||| | | | || ||||| |||||||||||
Sbjct 59794 ACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTG 59735
Query 38130 CCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATA 38189
|||||| || | ||| | | | || || ||||| || | ||| ||||| | || |||
Sbjct 59734 CCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATA 59675
Query 38190 TCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTAT 38249
| | ||||| || | | | | |||||| | || || ||||| | ||||| |
Sbjct 59674 ACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGT 59615
Query 38250 ACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGC 38309
||| | || |||| || | || || || || || | || || ||||| ||
Sbjct 59614 ACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGC 59555
Query 38310 ATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATC 38369
| ||| || || ||||| |||| || || || || | || ||||| || |||||
Sbjct 59554 AGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATGCCTTCAATGGAATCATC 59495
Query 38370 CTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAA 38429
||| |||| | || ||||| |||||||||||| ||| || || ||||| |||||
Sbjct 59494 CTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAA 59435
Query 38430 TGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATC 38489
|| ||||| || || | || ||||| |||| | ||||| ||||||| | |
Sbjct 59434 AGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGC 59375
Query 38490 ATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
|| || | | | ||||||||||||| | || ||||| | | |||||||| | |||
Sbjct 59374 CTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTC 59315
Query 38550 TATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609
| || | || | | | || ||||| |||||| ||||| | || || ||
Sbjct 59314 AGCAACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 59255
Query 38610 ACTATA-TGAATAATCTCTATCGTA 38633
||| || |||| ||||||| || ||
Sbjct 59254 ACTGTACTGAA-AATCTCTGTCATA 59231
>seq5
Length=350035
Score = 132 bits (146), Expect = 5e-26
Identities = 520/802 (65%), Gaps = 37/802 (5%)
Strand=Plus/Minus
Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873
|| || | || |||||||| || ||||| ||||| ||||| ||| |||| |||||
Sbjct 96891 GAAGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTTAGACCCTTCTTCCAACCGTAG 96832
Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTA---GGATTATCTATATATATTGTCATTGAT 36930
||||||||||| || | |||| | || | ||||| | | | ||| || ||
Sbjct 96831 AAATGCATACTTGTAA-TTTTACCCATTGATGGGGATTGTAGGAAAAGATT--CAAGGAG 96775
Query 36931 TGACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAG 36988
|| |||||| || ||| | | | | | || ||||| | | ||| |||||||
Sbjct 96774 TGGGATTGATCAATGTAAATGGAACGAT--CAGCAGCCATGTTGATAATGGTCTTTTGAG 96717
Query 36989 ATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTT 37045
| || |||||||| |||||||||| | ||| | | | || | | | || | ||
Sbjct 96716 AGATTTCCCAAACAGTTTTATATAGATCTTTCAAGTCTTGAGGAACGTTTGGTAAGTCTT 96657
Query 37046 GAATAGAACCATTATG--TAACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTC 37102
||| |||||||| || ||| ||| ||| ||| || || || ||| ||| |
Sbjct 96656 TAATGGAACCATTTTGAGTAATCAAAT---ATTGTTTCATACTATCATCCCAAATAC--C 96602
Query 37103 TACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATAC 37160
| | | | || | | || || |||||| || || || || || |||||||| ||
Sbjct 96601 CAGGTCGACCAAATCACGTAGTAAGTATGGATTGACGACTTGGAATTCACCAGATAAGAC 96542
Query 37161 TCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTG 37220
| | | || || || ||| |||||| | | ||||| | | | |||||
Sbjct 96541 ACGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACATTCATTGTACCCAAGAATTTG 96482
Query 37221 AGATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTA 37278
|||||||| || || |||||||| || || | ||| | |||| || |||||| |
Sbjct 96481 GGATGTAGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT--TTCTTAACCCATGTTTG 96424
Query 37279 TTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACA 37336
||| ||| |||| | ||||||||| | | | ||| || | || |||||
Sbjct 96423 ACAATGTCCTTCTTTAAAGTGTCCCAATCCCACATACCAAATGGCTTAGCATT--CCACA 96366
Query 37337 TATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGT 37396
| || |||||| |||||| ||| || ||||| | | | | || ||| || |
Sbjct 96365 TGTCGAATTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTT 96306
Query 37397 AAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTT 37456
||| ||||| ||| ||| || ||| || | ||||| || || |||||||||||||
Sbjct 96305 CCTTTTGAGCTAATTCACAAGAAGCTTCAAGGGTGGCATGGTAAATAGTTTCGAAAATTT 96246
Query 37457 GTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACAT 37516
| |||| | ||||| |||| ||| | || |||| | | || | ||| | ||
Sbjct 96245 GCTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCAGCATCATATAGGTAT 96186
Query 37517 CAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA---TCTAGACG 37573
| |||||||| ||||| || | | || ||||| ||| || ||||||| ||||| |
Sbjct 96185 CGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTGTGTCTCATATTAGAGTTTCTAGCC- 96127
Query 37574 ATTCTATCACTGGATAATAATT 37595
||| |||||||||||| ||
Sbjct 96126 --TCTGGCACTGGATAATAGTT 96107
Score = 91.5 bits (100), Expect = 1e-13
Identities = 287/445 (64%), Gaps = 0/445 (0%)
Strand=Plus/Minus
Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065
|||| | ||| || || | ||| || | |||||| | ||||| |||| || ||||||
Sbjct 95681 CATCCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGGGAACAAATCTC 95622
Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125
| | | | |||||| || || | | ||||| | | ||| ||||| || || |
Sbjct 95621 TTGCACGAATTTCTTCCTTACCATGAGTTTTTCTGATATCAACAAAGTCGAAGATGTCTG 95562
Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185
| |||||||| || | ||| | | || || ||||| || | ||| || || | |
Sbjct 95561 CATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCA 95502
Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245
|| | | |||||||| ||| | | ||| || | | ||||| || | ||||
Sbjct 95501 CGTAACGTGCAGTGTTATTGAATACACGGATCATGGGAATCAACCCATTTGAAGTACCGT 95442
Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305
| |||| | ||||||| || | | || ||||| | || | || | ||||
Sbjct 95441 TGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCAC 95382
Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365
||||| || || || | || || | ||| || || || | |||||||| || ||
Sbjct 95381 CTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGT 95322
Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425
| ||||| || | | | |||||| |||||||||||| ||| || ||||| ||||
Sbjct 95321 CGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAA 95262
Query 38426 ATAATGTAGGAGATGCATGTATGAA 38450
||| || || || || || ||||
Sbjct 95261 ATAGAGTGGGGGAAGCGTGAGTGAA 95237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524483745760
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