Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq19 96.9 4e-15
seq9 91.5 2e-13
seq2 89.7 6e-13
>seq19
Length=306686
Score = 96.9 bits (106), Expect = 4e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417
||| |||| ||||| || || |||||| | || |||||| || || |||||| |
Sbjct 276521 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACA 276580
Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAAC 19477
|||||| |||||||||||| ||||| ||| ||||| || || ||| | ||||| ||
Sbjct 276581 TATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTACCAGATTTAATTATCAAT 276640
Query 19478 CCACATGCTTTTCCAAGTCGAATGAC 19503
|| |||||| ||||| ||| |||||
Sbjct 276641 CCTCATGCTATTCCATCTCGTATGAC 276666
>seq9
Length=229753
Score = 91.5 bits (100), Expect = 2e-13
Identities = 290/452 (64%), Gaps = 27/452 (6%)
Strand=Plus/Plus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
|||||| || | |||| | |||||| ||| | ||| ||||| || | ||||||||
Sbjct 121421 TTGTTCCTTCAAGGCTTCAACATGATCCTTATACACATGCGCATCCCCCAAAGTATGAAT 121480
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
|| ||||| |||| |||||| || ||| |||||| | || || | ||||| ||
Sbjct 121481 GAACTCACCCGGTTCCATATCGACGACTTTAGCAATCATTCTGGTCAACAGGGCATATGA 121540
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984
|| | |||||| || ||||||| |||||||| || | || |||||| |||
Sbjct 121541 GGCAATATTAAATGGCACACCTAGCCCCATATCACAGGAACGCTGGTATAACAAACATGA 121600
Query 6985 CAAGATAA-------------AATATTGTCTATAG---------CATAAAATTGACACAA 7022
| | | | | | ||| | | ||||||| || | ||
Sbjct 121601 AAGGCGAGGCTTACCGCTTCCACTTTCCTCTTTGGGGAAACTGACATAAAACTGTGAAAA 121660
Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082
| ||| ||||| |||||| | || || | ||| | |||||||||||| |||| |
Sbjct 121661 AATATGGCATGGTGGTAAAGCCATCTTGTCAAAATCTGCAGGATTCCAAGCACTCATGAT 121720
Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTAT 7142
|| | |||||| | || |||||||||||||| ||||| | | ||||| ||
Sbjct 121721 GATCCTTCTATCGTAAGGGTTTGTTTTTAATTTGTGTATAACCTGCTTCAGCTGATCGAT 121780
Query 7143 ACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTG 7202
|| || || ||| | | || || | | || | || || ||||||||||||||
Sbjct 121781 GCCTTGTCCGGTATAGTCATCATCGCACGTCTTGTATTGGGCACCGAAATGTCTCCATTG 121840
Query 7203 AAACCCATAAATAGGACCTAAATCACCTTCTT 7234
|||||||||| || || | || ||| |||
Sbjct 121841 GAACCCATAAACGGGGCCCAGGTCTCCTACTT 121872
>seq2
Length=799714
Score = 89.7 bits (98), Expect = 6e-13
Identities = 194/288 (67%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 164794 GTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATT 164853
|| |||||||| | || ||||||| |||||||| || | ||||||||||| |
Sbjct 385777 GTAGTTAATCAACTACTGGCTAAAATGGATGGTGTTGATCAACTGAATAATATTTTGGTC 385718
Query 164854 GTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTA 164913
||||||||||||| || ||||| || ||| |||| | ||||| || ||| ||||
Sbjct 385717 ATAGGTATGACCAATCGTAAAGATTTGATCGATATTGCTCTTTTACGTCCAGGTAGATTC 385658
Query 164914 GAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTT 164973
||| | | | ||||| ||||| ||| || |||| | || || ||||| | ||
Sbjct 385657 GAAGTTCAGGTTGAAATTCATTTACCGGACGAAAAAGGTAGACTGCAGATTTTTGACATT 385598
Query 164974 CATGTGGCTAAAATGAAATCCTGTGATAT-ATTATCTCCCGATGTAGATTTAAATAAAAT 165032
|| | ||||||| | | |||| || | | |||||| | ||| | || |
Sbjct 385597 CAAACGAAGAAAATGAGAGAAAATAATATGATGAGC-GACGATGTTAACTTAGCTGAACT 385539
Query 165033 AGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGT 165080
||| || |||||| |||| | ||||||||| | || || |||||
Sbjct 385538 AGCAGCTTTAACTAACAATTTTTCCGGTGCTGAAATTGAAGGTTTAGT 385491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871597786400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |