Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq19 96.9 4e-15 seq9 91.5 2e-13 seq2 89.7 6e-13 >seq19 Length=306686 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417 ||| |||| ||||| || || |||||| | || |||||| || || |||||| | Sbjct 276521 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACA 276580 Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAAC 19477 |||||| |||||||||||| ||||| ||| ||||| || || ||| | ||||| || Sbjct 276581 TATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTACCAGATTTAATTATCAAT 276640 Query 19478 CCACATGCTTTTCCAAGTCGAATGAC 19503 || |||||| ||||| ||| ||||| Sbjct 276641 CCTCATGCTATTCCATCTCGTATGAC 276666 >seq9 Length=229753 Score = 91.5 bits (100), Expect = 2e-13 Identities = 290/452 (64%), Gaps = 27/452 (6%) Strand=Plus/Plus Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869 |||||| || | |||| | |||||| ||| | ||| ||||| || | |||||||| Sbjct 121421 TTGTTCCTTCAAGGCTTCAACATGATCCTTATACACATGCGCATCCCCCAAAGTATGAAT 121480 Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929 || ||||| |||| |||||| || ||| |||||| | || || | ||||| || Sbjct 121481 GAACTCACCCGGTTCCATATCGACGACTTTAGCAATCATTCTGGTCAACAGGGCATATGA 121540 Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984 || | |||||| || ||||||| |||||||| || | || |||||| ||| Sbjct 121541 GGCAATATTAAATGGCACACCTAGCCCCATATCACAGGAACGCTGGTATAACAAACATGA 121600 Query 6985 CAAGATAA-------------AATATTGTCTATAG---------CATAAAATTGACACAA 7022 | | | | | | ||| | | ||||||| || | || Sbjct 121601 AAGGCGAGGCTTACCGCTTCCACTTTCCTCTTTGGGGAAACTGACATAAAACTGTGAAAA 121660 Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082 | ||| ||||| |||||| | || || | ||| | |||||||||||| |||| | Sbjct 121661 AATATGGCATGGTGGTAAAGCCATCTTGTCAAAATCTGCAGGATTCCAAGCACTCATGAT 121720 Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTAT 7142 || | |||||| | || |||||||||||||| ||||| | | ||||| || Sbjct 121721 GATCCTTCTATCGTAAGGGTTTGTTTTTAATTTGTGTATAACCTGCTTCAGCTGATCGAT 121780 Query 7143 ACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTG 7202 || || || ||| | | || || | | || | || || |||||||||||||| Sbjct 121781 GCCTTGTCCGGTATAGTCATCATCGCACGTCTTGTATTGGGCACCGAAATGTCTCCATTG 121840 Query 7203 AAACCCATAAATAGGACCTAAATCACCTTCTT 7234 |||||||||| || || | || ||| ||| Sbjct 121841 GAACCCATAAACGGGGCCCAGGTCTCCTACTT 121872 >seq2 Length=799714 Score = 89.7 bits (98), Expect = 6e-13 Identities = 194/288 (67%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 164794 GTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATT 164853 || |||||||| | || ||||||| |||||||| || | ||||||||||| | Sbjct 385777 GTAGTTAATCAACTACTGGCTAAAATGGATGGTGTTGATCAACTGAATAATATTTTGGTC 385718 Query 164854 GTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTA 164913 ||||||||||||| || ||||| || ||| |||| | ||||| || ||| |||| Sbjct 385717 ATAGGTATGACCAATCGTAAAGATTTGATCGATATTGCTCTTTTACGTCCAGGTAGATTC 385658 Query 164914 GAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTT 164973 ||| | | | ||||| ||||| ||| || |||| | || || ||||| | || Sbjct 385657 GAAGTTCAGGTTGAAATTCATTTACCGGACGAAAAAGGTAGACTGCAGATTTTTGACATT 385598 Query 164974 CATGTGGCTAAAATGAAATCCTGTGATAT-ATTATCTCCCGATGTAGATTTAAATAAAAT 165032 || | ||||||| | | |||| || | | |||||| | ||| | || | Sbjct 385597 CAAACGAAGAAAATGAGAGAAAATAATATGATGAGC-GACGATGTTAACTTAGCTGAACT 385539 Query 165033 AGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGT 165080 ||| || |||||| |||| | ||||||||| | || || ||||| Sbjct 385538 AGCAGCTTTAACTAACAATTTTTCCGGTGCTGAAATTGAAGGTTTAGT 385491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871597786400